Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_C03
         (843 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.22 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   8.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   8.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   8.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = +3

Query: 630 ATTTIQFLVKVVTHQHHHFWT*ANFHH*QQEARVTKH 740
           ATTT   L+K  T Q HH     N HH  Q   V  H
Sbjct: 125 ATTTATGLIKQETLQRHHHL--QNHHHHLQSTAVQDH 159


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 753 GAVVGAWSPAP 721
           G +VG WSP P
Sbjct: 195 GCLVGTWSPDP 205


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 753 GAVVGAWSPAP 721
           G +VG WSP P
Sbjct: 195 GCLVGTWSPDP 205


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 753 GAVVGAWSPAP 721
           G +VG WSP P
Sbjct: 195 GCLVGTWSPDP 205


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,199
Number of Sequences: 438
Number of extensions: 4067
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)