Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_C01
         (824 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113343-1|AAM29348.1| 1307|Drosophila melanogaster GH12701p pro...    29   5.8  
AY058648-1|AAL13877.1|  846|Drosophila melanogaster LD35132p pro...    29   5.8  
AE014297-2580|AAF55594.2|  846|Drosophila melanogaster CG7719-PA...    29   5.8  
AE014296-3443|AAF51654.2| 1307|Drosophila melanogaster CG32432-P...    29   5.8  
AY071543-1|AAL49165.1|  645|Drosophila melanogaster RE57944p pro...    29   7.7  
AE014298-2622|AAF48772.2|  645|Drosophila melanogaster CG32557-P...    29   7.7  

>AY113343-1|AAM29348.1| 1307|Drosophila melanogaster GH12701p
           protein.
          Length = 1307

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +3

Query: 267 ATRPTSPESCSIRRKSGAVPAAPHRPLSK*R---RAEDTRCRSSSATQT 404
           AT       C +RR +  +P+  HR ++K R       T+CR+  AT+T
Sbjct: 49  ATSRLRETRCKLRRHNKCLPSEQHRNVAKMRLKVSTSATQCRAIKATET 97


>AY058648-1|AAL13877.1|  846|Drosophila melanogaster LD35132p
           protein.
          Length = 846

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 27/106 (25%), Positives = 46/106 (43%)
 Frame = +2

Query: 167 FAIVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDKKEVWSGAGSATSAA 346
           F+  E N++ T  +   T  +  D S + +  T ++AD S+       + S  G+A   A
Sbjct: 310 FSAEEANESIT--HTCTTNVNPQDSSSSCSFHTCNSADLSKC---SPPLESKDGAAAGNA 364

Query: 347 FKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 484
              K+   + +    C   GC  +E     +A  DG HL  +D +I
Sbjct: 365 IPSKRRVEFVLDAAPCQ--GCKLAEQDSSNMATNDGKHLPKIDNAI 408


>AE014297-2580|AAF55594.2|  846|Drosophila melanogaster CG7719-PA
           protein.
          Length = 846

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 27/106 (25%), Positives = 46/106 (43%)
 Frame = +2

Query: 167 FAIVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDKKEVWSGAGSATSAA 346
           F+  E N++ T  +   T  +  D S + +  T ++AD S+       + S  G+A   A
Sbjct: 310 FSAEEANESIT--HTCTTNVNPQDSSSSCSFHTCNSADLSKC---SPPLESKDGAAAGNA 364

Query: 347 FKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 484
              K+   + +    C   GC  +E     +A  DG HL  +D +I
Sbjct: 365 IPSKRRVEFVLDAAPCQ--GCKLAEQDSSNMATNDGKHLPKIDNAI 408


>AE014296-3443|AAF51654.2| 1307|Drosophila melanogaster CG32432-PA
           protein.
          Length = 1307

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +3

Query: 267 ATRPTSPESCSIRRKSGAVPAAPHRPLSK*R---RAEDTRCRSSSATQT 404
           AT       C +RR +  +P+  HR ++K R       T+CR+  AT+T
Sbjct: 49  ATSRLRETRCKLRRHNKCLPSEQHRNVAKMRLKVSTSATQCRAIKATET 97


>AY071543-1|AAL49165.1|  645|Drosophila melanogaster RE57944p
           protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 341 AAFKVKKGGRYQMQVELCNSDGCSSSEGV---EIVVADTDGSHLRPLD 475
           A F V +GGRY+ +V       C  S  +   ++VV  +DG+ + P++
Sbjct: 295 AHFPVVRGGRYRFRVIFNGVSNCPISFSIDKHDLVVIASDGNDIEPVE 342


>AE014298-2622|AAF48772.2|  645|Drosophila melanogaster CG32557-PA
           protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 341 AAFKVKKGGRYQMQVELCNSDGCSSSEGV---EIVVADTDGSHLRPLD 475
           A F V +GGRY+ +V       C  S  +   ++VV  +DG+ + P++
Sbjct: 295 AHFPVVRGGRYRFRVIFNGVSNCPISFSIDKHDLVVIASDGNDIEPVE 342


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,298,471
Number of Sequences: 53049
Number of extensions: 671017
Number of successful extensions: 2097
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2097
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)