Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_C01
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 30 1.7
AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical... 29 5.3
AF040642-10|AAB94949.2| 576|Caenorhabditis elegans Hypothetical... 29 5.3
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 28 9.3
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 28 9.3
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 28 9.3
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 9.3
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 28 9.3
AC006655-5|AAF39873.1| 172|Caenorhabditis elegans Hypothetical ... 28 9.3
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = -3
Query: 474 SRGLKWLPSVSATTISTPSLELHPSELQSSTCIWYLPPFFTLKAADVALPAPLQ-TSFLS 298
S K L + +ST + ++ S LQS + Y P F A++A + + T+ S
Sbjct: 944 SHDQKLLRRTARAIVSTKNAVVYASALQSDFSLHYNPTFRKYLWAEIAKMSTFEKTALFS 1003
Query: 297 SRTLDLSAASPV--HTFQ-LTETSAASFLVTSW 208
+ + D+ AS + H+ + + E L+T+W
Sbjct: 1004 TNSTDILPASRILLHSVKTIDELQQIRGLLTNW 1036
>AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical
protein Y48B6A.11 protein.
Length = 922
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = +2
Query: 251 WNVWTGDAADKSRVLLDKKEVWSGAGSATSAAFKVKKGGRYQMQVELCNSDGCSSSEGVE 430
W W G + + KKEV + + A K+ K R +SDG S S G E
Sbjct: 413 WTYWYGGGRELW-IPKKKKEVPKKRRQSLADASKIAKRARLGASSTATDSDGSSGSSGSE 471
Query: 431 IVVADTDGSHLRPLDYSI 484
+ P Y++
Sbjct: 472 EATEGSSFMRALPAGYTV 489
>AF040642-10|AAB94949.2| 576|Caenorhabditis elegans Hypothetical
protein C50D2.1 protein.
Length = 576
Score = 28.7 bits (61), Expect = 5.3
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = +2
Query: 245 VNWNVWTGDAADKSRVLLDKKEVWSGAGSATSAAFKVKKGGRYQMQVELCNSDGCSSSEG 424
V++ W G +D L ++ WS + ++ + G + + + G +G
Sbjct: 408 VDFGTWGGGYSDN----LGVRDFWSQTQEYGANWYEGQYGYKTGWSIPIVQGIGVEGGQG 463
Query: 425 VEIVVADTDGSHLRPLDYSIGEKNKPFKQTSGKVVGAYFVEWGV-YPRKFPVDRVPVPNL 601
++ V +G RP+ + G PF + + VG ++ GV + + F V V V
Sbjct: 464 TQVSVPIKEGELGRPISVTNGYHVGPFMGLADR-VGVDWLNGGVSWNKGFAVPFVGVGVN 522
Query: 602 THLLYGF 622
T GF
Sbjct: 523 TGTAVGF 529
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 162 RSPQPRFGFPWRAAGADGERGHREYERYHPMP 67
RSP+ R+G G G +++Y+R +P P
Sbjct: 43 RSPRARYGGGGGGGGGGGRGRNQQYDRENPQP 74
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/104 (23%), Positives = 45/104 (43%)
Frame = -3
Query: 456 LPSVSATTISTPSLELHPSELQSSTCIWYLPPFFTLKAADVALPAPLQTSFLSSRTLDLS 277
+ S+ A+++ T L S + S + L P + P TS +S S
Sbjct: 132 IASLQASSMLTVPLLQAASHIPSMLQLCQLQPTTIQSPVYASTQQPASTS--ASSLFSSS 189
Query: 276 AASPVHTFQLTETSAASFLVTSWL*AVAAWLTSTIANVRSPQPR 145
++S H F+ +E++ SF +S + + + +V PQP+
Sbjct: 190 SSSAFHPFRPSESAQQSFPSSSVIVKIERRSPDSSTDVNMPQPQ 233
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform d protein.
Length = 1379
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 631 NRNEAVEQMSQVRNRNAVHRELSR-IHTPFDEVSAHHFSRS 512
NR+E E S+ + N++H E S H+ ++ S H+ S
Sbjct: 1301 NRSELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSS 1341
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 631 NRNEAVEQMSQVRNRNAVHRELSR-IHTPFDEVSAHHFSRS 512
NR+E E S+ + N++H E S H+ ++ S H+ S
Sbjct: 1301 NRSELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSS 1341
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 631 NRNEAVEQMSQVRNRNAVHRELSR-IHTPFDEVSAHHFSRS 512
NR+E E S+ + N++H E S H+ ++ S H+ S
Sbjct: 1301 NRSELREMRSEEKRSNSMHHEESHYAHSSYEHTSEHYSQSS 1341
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -3
Query: 318 LQTSFLSSRTLDLSAASPVHTFQLTETSAASFLVTSWL*AVAAWLTSTIANVRSPQP 148
+Q + S T+D S + + +L E +++W A L S +RSP P
Sbjct: 97 VQNATTFSATIDSSTSQKLSQIELPEHLTVPSAISTWFPVQYAVLPSLFFEIRSPPP 153
>AC006655-5|AAF39873.1| 172|Caenorhabditis elegans Hypothetical
protein H10D18.1 protein.
Length = 172
Score = 27.9 bits (59), Expect = 9.3
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +2
Query: 176 VEVNQAATAYNQLVTKKDAADVSVNWNVW 262
+E+++ AY Q+++ K +D ++ WN++
Sbjct: 3 LEISEKIKAYRQVMSAKSPSDAALTWNLF 31
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,575,881
Number of Sequences: 27780
Number of extensions: 329636
Number of successful extensions: 960
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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