Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_B24
         (1002 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    58   7e-09
Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical pr...    29   6.9  
Z81127-5|CAB03390.2|  512|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 58.4 bits (135), Expect = 7e-09
 Identities = 39/129 (30%), Positives = 54/129 (41%)
 Frame = +1

Query: 313 VDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDTEEEELARA 492
           + IE+ FY  VH                R  IV G  EP  ++   P  +  E ++LA  
Sbjct: 41  IQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEGLEGDQLAEL 100

Query: 493 VQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQD 672
                          KA E   DP+ KGI DFW    R   +++E ++EHD PIL  L D
Sbjct: 101 Y--------------KAAEA--DPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTD 144

Query: 673 IKVQMHEDP 699
           +     +DP
Sbjct: 145 VTTAASKDP 153


>Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical
           protein T14B1.1 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 448 NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMD 561
           +P RD+  EE LA+ ++  A   GE+++ +   EP  D
Sbjct: 6   DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNAD 43


>Z81127-5|CAB03390.2|  512|Caenorhabditis elegans Hypothetical
           protein T22G5.5 protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 14  DRVTSPSFFSENFDGGESEILNMGTVERSGDDH 112
           DR T    +++ + G ESE++N+G+    G  H
Sbjct: 117 DRYTDDHGWTQKYTGTESEVINLGSYNYLGFSH 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,676,277
Number of Sequences: 27780
Number of extensions: 323756
Number of successful extensions: 964
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2626021738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)