Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_B18
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552...    31   1.2  

>03_05_0820 + 27951971-27954236,27954746-27955008,27955169-27955288,
            27957790-27957856,27958310-27958515
          Length = 973

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -1

Query: 386  DNPTHALQYKLVFCYLYKY-CQGYFPNIH*KCTSSRFIN*NRNFTSVLGLH-CSN*IRLY 213
            +NP H L Y+L     ++Y   G    +  +C S R+ +   N  S L L  CS      
Sbjct: 800  ENPKHELCYELALVITFEYELSGVTVEVGKECLSFRYSSLIENQYSQLDLRSCS------ 853

Query: 212  *IFVSTKCTIQSVRSNCLTVSY 147
             +  S KCT+ +V + C+ + +
Sbjct: 854  -VEKSQKCTVYAVSATCIWLDW 874


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,112,586
Number of Sequences: 37544
Number of extensions: 349850
Number of successful extensions: 544
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)