Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_B12
         (928 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0054 - 8611989-8612309,8612350-8612566,8613047-8613284,861...    29   4.0  
09_06_0234 - 21747724-21747839,21748027-21748096,21749157-217492...    29   4.0  
01_01_0189 - 1640581-1640832,1640936-1641132,1641243-1641608,164...    29   5.2  
10_06_0030 - 9834515-9834608,9834784-9835277                           29   6.9  
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874...    29   6.9  
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108...    29   6.9  
06_03_1056 + 27239176-27242361                                         28   9.2  

>10_05_0054 -
           8611989-8612309,8612350-8612566,8613047-8613284,
           8613633-8613843,8613924-8614048,8615849-8615968,
           8617245-8618076
          Length = 687

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 473 RVDNPGDVCSATLSDRPRADGNSFDAAVSDVTGSVA 366
           R DN   +  +  +DR  AD   FDA V+D+ G++A
Sbjct: 139 RPDNTEVLIGSPSADRITADAGHFDALVADLAGALA 174


>09_06_0234 -
           21747724-21747839,21748027-21748096,21749157-21749294,
           21749389-21749493,21750157-21750527,21750612-21750694,
           21750803-21751063,21751425-21751606,21752539-21752649,
           21752727-21752798,21752883-21753036,21753329-21753341,
           21754015-21754084,21754409-21754485,21754582-21754640,
           21755327-21755580
          Length = 711

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = +3

Query: 516 DDIQNLERELGKNGLYYGAGYELPADLKTQTAFSTKMVFADATSINNHLYDLVTGRRL 689
           D++  L R  G+  + +GAGY + + +K Q  F    +      +NN ++  +T  R+
Sbjct: 229 DELGQLLRSYGEARIGFGAGYNIQSAIK-QAVFHCPFLRGGIKDLNNVVFLSITSSRI 285


>01_01_0189 -
           1640581-1640832,1640936-1641132,1641243-1641608,
           1641826-1642224,1642313-1642719,1642814-1642941
          Length = 582

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +1

Query: 400 SKLLPSARGRSLSVALQTSPGLST-RPKDSSLPTDILTILTTSKISSVSLAKTAYTMEPG 576
           S+ L   +   L  A+    G+   R ++S L    LT  +TSK SSV    +  T +  
Sbjct: 210 SRALADTKKLLLEGAMAGKGGVQREREEESRLGASTLTSESTSK-SSVEWRSSTVTKDSE 268

Query: 577 TNYPQT*RPRRHSAR 621
           T YP +   RR S+R
Sbjct: 269 TEYPFSSSSRRSSSR 283


>10_06_0030 - 9834515-9834608,9834784-9835277
          Length = 195

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 667 TWLRGGDYINAGENCAQFSXDNXGLRRFVAXSSXGXXSXG 786
           TW  GG+ +NAG+    FS D  G+R +   S  G    G
Sbjct: 119 TWWHGGE-VNAGDGDVDFSTDVVGIRVWGRWSWMGSEQDG 157


>07_03_0561 +
           19485218-19485242,19485323-19486467,19487354-19487476,
           19487553-19487626,19487886-19487946,19488285-19488370,
           19488795-19488864,19489026-19489122,19489342-19489481,
           19490225-19490308,19490313-19490346,19491833-19491951
          Length = 685

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 36/142 (25%), Positives = 52/142 (36%)
 Frame = +1

Query: 166 PPREDPDRQRAGTPSRLLGRRKSD*PWQDKRLPSELQCERTVCARQ*GPQRGKANTQQDP 345
           PP   P R + G      G  K   PW++    +E   +    A        K     DP
Sbjct: 83  PPPPQPKRLQGGRKKGAGGHGKLPLPWEEWEEANEKWLDEREAA-------AKGEEPPDP 135

Query: 346 RSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKDSSLPTDILTILTTS 525
              P   A +P T+E A   LLP  R +   +A   +   S  P    +  D + +  T 
Sbjct: 136 EVPPAVAAGVP-TAEPAPEVLLPLLRFQKEWLAWALAQEAS--PSRGGILADEMGMGKT- 191

Query: 526 KISSVSLAKTAYTMEPGTNYPQ 591
            I  +SL  TA  + P    P+
Sbjct: 192 -IQGISLVITARRLRPPAPPPR 212


>05_01_0160 +
           1081416-1081647,1081840-1082012,1082169-1082246,
           1082372-1082529,1082558-1082709,1083232-1083290,
           1083633-1083912,1084235-1084470,1084601-1084744,
           1084845-1085012
          Length = 559

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 435 KRCAADVARIVNASEGLVVAYGYSDNSDDIQNLERELGKNG 557
           +R   D   +V + +GL+ A+    + D++ +L+  LG+ G
Sbjct: 109 RRYKCDFCSVVRSKKGLIRAHVLEHHKDEVDDLDDYLGRGG 149


>06_03_1056 + 27239176-27242361
          Length = 1061

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 217 VIDLVYQPSVDRDLHEVVHTEVGYW 143
           V D +   S+DR LH   HTE G W
Sbjct: 814 VFDFMPNYSLDRWLHRAKHTETGKW 838


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,786,213
Number of Sequences: 37544
Number of extensions: 465600
Number of successful extensions: 1240
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)