Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_B12
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical ... 31 0.88
AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical ... 31 0.88
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 31 0.88
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 2.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 4.7
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 6.2
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 29 6.2
>AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical
protein Y111B2A.9b protein.
Length = 326
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 136 VLPNTLLRYVPPREDPDRQRAGTPSRLL 219
V P+ L+ PP DP QR+GTPS LL
Sbjct: 4 VSPSNLVFPPPPSPDPYTQRSGTPSALL 31
>AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical
protein C15F1.5b protein.
Length = 311
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Frame = +1
Query: 253 KRLPSELQCERTVCARQ*GPQRGKANTQQDPRSCPWTTATLPVTSET--AASKLLPSARG 426
+ PSEL+C+ VC + G + +CP T +P E+ A P +
Sbjct: 122 RNFPSELECDHDVCIKCIGSMLDECEKNGKSPACPVKTCAIPYRCESVLALDAQFPEKKA 181
Query: 427 RSLSVALQTSPGLSTRPKD 483
LQ + T D
Sbjct: 182 FFSKFTLQAKFSMQTLKDD 200
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Frame = +1
Query: 253 KRLPSELQCERTVCARQ*GPQRGKANTQQDPRSCPWTTATLPVTSET--AASKLLPSARG 426
+ PSEL+C+ VC + G + +CP T +P E+ A P +
Sbjct: 192 RNFPSELECDHDVCIKCIGSMLDECEKNGKSPACPVKTCAIPYRCESVLALDAQFPEKKA 251
Query: 427 RSLSVALQTSPGLSTRPKD 483
LQ + T D
Sbjct: 252 FFSKFTLQAKFSMQTLKDD 270
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 355 PWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKDSSLP-TDILTILTTSKI 531
P TT+T P T+ + P++ + A P +T+P +S P T + TIL ++
Sbjct: 210 PMTTSTTPTTTTST----FPTSTTEKSTTA---QPSTTTKPTTTSPPTTQVKTILPATEA 262
Query: 532 SSVSLAKTAYTMEPGTNYPQT 594
+ K Y + P T P T
Sbjct: 263 QKI-FTKPQYQIWPTTTRPMT 282
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 436 SVALQTSPGLSTRPKDSSLPTDILTILTTSKISSVSLAKTAYTME 570
S + ++ STRP SS TD T+ TSK S+V+ T ++E
Sbjct: 697 STIITSTSSTSTRPGTSSTATDSPTMDDTSKTSTVTSEGTTLSIE 741
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 361 TTATLP--VTSETAASKLLPSARGRSLSVALQTSPGLSTRPKDSSLPTDILTILTTSKIS 534
TT T P TSET + + + + T+P +T P ++ PT T T+K +
Sbjct: 242 TTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTP--TTTPTTTTTPTTTTTTAKTTKST 299
Query: 535 SVSLAKTAYTMEPGT 579
+ + T T P T
Sbjct: 300 TTTTKTTKTTSTPTT 314
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical protein
F33E2.6 protein.
Length = 846
Score = 29.1 bits (62), Expect = 4.7
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 1/168 (0%)
Frame = +1
Query: 169 PREDPDRQRAG-TPSRLLGRRKSD*PWQDKRLPSELQCERTVCARQ*GPQRGKANTQQDP 345
PR P + A T + G +++ P + P + + RT R T
Sbjct: 671 PRTVPPKTEAPMTEVPMTGPSRTEVPMTE---PPKTEQPRTAPPRTEVSMTLPPETVPPK 727
Query: 346 RSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKDSSLPTDILTILTTS 525
P T + S T + G S +V +T P +T K + T++ T
Sbjct: 728 TEAPRTEVPMTGPSRTEVPMTVTPETGLSSTVTSKTEPPKTTTEKRITPRTEVPK--TVP 785
Query: 526 KISSVSLAKTAYTMEPGTNYPQT*RPRRHSARRWSLPTQRQSTITCTT 669
+ + T P T P T PR R L T + T+T T
Sbjct: 786 PRTGPPMTVPPGTEAPTTEAPMTITPRTEQLRTEQLRTDQSKTVTPKT 833
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 364 TATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKDSSLPTDILTILTTSKISS 537
T T P T+E + ++ + ++S T+P LS P D + TDI + ++SS
Sbjct: 208 TTTEPSTTEPSTTEEFTTEETTTVSTNPPTTPELSDDPTDGNDATDIDDKIVKKEVSS 265
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 6.2
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = +1
Query: 361 TTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKDSSLPTDI----LTILTTSK 528
+T+T +S T S PS+ S S+ T+P +++ SSLP + L TTS
Sbjct: 337 STSTTQQSSSTITSS--PSSTTLSTSIPTTTTPEITSTL--SSLPDNAICSYLDETTTST 392
Query: 529 ISSVSLAKTAYTMEPGTNYPQT*RPRRHSARRWSLPTQRQSTITCTT 669
+ ++ + T EP T+ T S + PT +T T +T
Sbjct: 393 TFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTAST 439
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 6.2
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = +1
Query: 361 TTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKDSSLPTDI----LTILTTSK 528
+T+T +S T S PS+ S S+ T+P +++ SSLP + L TTS
Sbjct: 337 STSTTQQSSSTITSS--PSSTTLSTSIPTTTTPEITSTL--SSLPDNAICSYLDETTTST 392
Query: 529 ISSVSLAKTAYTMEPGTNYPQT*RPRRHSARRWSLPTQRQSTITCTT 669
+ ++ + T EP T+ T S + PT +T T +T
Sbjct: 393 TFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTAST 439
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 28.7 bits (61), Expect = 6.2
Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +1
Query: 361 TTATLPVTS-ETAA-SKLLPSARGRSLSVALQTSPGLSTRPKDSSL--PTD-ILTILTTS 525
TT P T ETA+ S+ PSA +L+ + P S P+ S+ PT ILT TS
Sbjct: 908 TTTVEPSTPLETASTSQSTPSA---TLTSTTENIPSTSKIPETSTTQRPTSPILTSGATS 964
Query: 526 KISSVSLAKTAYTMEPGTNYPQT*RPRRHSA 618
SS T+ T T P T P SA
Sbjct: 965 TSSSTESTTTSPTTSTTTTLPPTTTPYNLSA 995
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,721,361
Number of Sequences: 27780
Number of extensions: 369948
Number of successful extensions: 1002
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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