Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_B12
         (928 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              26   0.56 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   3.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   5.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   5.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   5.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.8 bits (54), Expect = 0.56
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 232 FSFSPVIDLVYQPSVDRDLHEVVHTEV 152
           FSF     LVY+PS  R  HE+  T+V
Sbjct: 507 FSFHQWGILVYEPSACRPRHEIRSTDV 533


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 215 YWGEGKVTNLGKIRGFPRSYNVNEQFALVSKGHNEG 322
           Y+ EG   + GK RGF    N N+ +++  K  N G
Sbjct: 19  YFDEGG-RSYGKGRGFIIQNNNNDDWSVGKKNSNSG 53


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 193 SVDRDLHEVVHTEVGYWGVRIQQVLICVVVWLRGG 89
           S+DR +H       G W  R   V    VVWL  G
Sbjct: 120 SLDRYIHIKDPLRYGRWVTRRIAVAGIAVVWLLAG 154


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 417 STGPITKRCAADVARIVNASEGLVVAYGYSDNSD 518
           +T PIT RC  +  +I +     VVA G + N D
Sbjct: 365 ATLPITFRCLEENNKIDSRVTRFVVAVGATVNMD 398


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 364 TATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRP 477
           T TLP  S T      PSA   + +     + G +T P
Sbjct: 225 TTTLPAASATGTGPATPSAVVATSNATAAMTTGTTTIP 262


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 149 PYFGMYH-LVKIPIDRGLVHQVDYWGEGKVTNLGKI 253
           P +  +H L++IP D    +++D W     + L KI
Sbjct: 522 PKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKI 557


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 149 PYFGMYH-LVKIPIDRGLVHQVDYWGEGKVTNLGKI 253
           P +  +H L++IP D    +++D W     + L KI
Sbjct: 522 PKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKI 557


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 212 DYWGEGKVTNLGKIRGFPRSYNV 280
           D WG+     + K  G P S NV
Sbjct: 68  DQWGDKTFVIIMKFNGVPSSLNV 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,757
Number of Sequences: 438
Number of extensions: 4633
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)