Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_B11
(892 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 240 2e-64
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 217 2e-57
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 214 1e-56
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 162 5e-41
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 142 8e-35
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 35 0.018
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 34 0.024
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 33 0.055
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 8.3
SPAC1783.04c |hst4||Sir2 family histone deacetylase Hst4|Schizos... 26 8.3
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 26 8.3
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 240 bits (587), Expect = 2e-64
Identities = 119/180 (66%), Positives = 139/180 (77%), Gaps = 1/180 (0%)
Frame = +1
Query: 187 LSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQ 366
LSGE+ +D IVLLDV PLT+GIET GGVMTKLI RNT IPT+KSQIFSTA DNQ+TV IQ
Sbjct: 409 LSGEEGSDNIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQ 468
Query: 367 VYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAEDK-GTGNREK 543
VYEGER +TKDN+LLGKFDL GIPPAPRG+PQIEVTFE+DANG+L VSA DK G G EK
Sbjct: 469 VYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEK 528
Query: 544 IVITNDQNRLTPEDIERMIXXXXXXXXXXXXXXXRVKSXNELESYAYSIXNQLQDKEKLG 723
+VI ND+ RL+ EDIERM+ R+++ N LE+YAYS+ Q D E+LG
Sbjct: 529 LVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLG 588
Score = 65.7 bits (153), Expect = 8e-12
Identities = 29/46 (63%), Positives = 41/46 (89%)
Frame = +3
Query: 6 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINP 143
VL+D+++ K ++D+IVLVGGSTRIPKVQ+L++ FF GK+ S+GINP
Sbjct: 350 VLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINP 394
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 217 bits (530), Expect = 2e-57
Identities = 105/170 (61%), Positives = 128/170 (75%)
Frame = +1
Query: 199 QDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEG 378
+ T ++LLDV PL+MGIET GGVMT LI RNT IPTKKS+IFST SDNQ V IQV+EG
Sbjct: 384 EKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEG 443
Query: 379 ERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAEDKGTGNREKIVITN 558
ER TKD +LLGKF+L+GIPPAPRG+PQIEVTF++DANGIL VSA +KGTG +KI ITN
Sbjct: 444 ERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITN 503
Query: 559 DQNRLTPEDIERMIXXXXXXXXXXXXXXXRVKSXNELESYAYSIXNQLQD 708
D+ RL+ E+I+RM+ R+++ N LESYAYS+ N L D
Sbjct: 504 DKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDD 553
Score = 70.1 bits (164), Expect = 4e-13
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = +3
Query: 6 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINP 143
VL D+ ++K V+EIVLVGGSTRIP+VQ+LV +FFNGKEP + INP
Sbjct: 318 VLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINP 363
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 214 bits (523), Expect = 1e-56
Identities = 102/170 (60%), Positives = 128/170 (75%)
Frame = +1
Query: 199 QDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEG 378
+ T ++LLDV PL++GIET GGVMT LI RNT IPTKKS++FST +DNQ V IQV+EG
Sbjct: 384 EKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEG 443
Query: 379 ERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAEDKGTGNREKIVITN 558
ER TKD +LLGKF+L+GIPPAPRG+PQIEVTF++DANGIL VSA +KGTG +KI ITN
Sbjct: 444 ERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITN 503
Query: 559 DQNRLTPEDIERMIXXXXXXXXXXXXXXXRVKSXNELESYAYSIXNQLQD 708
D+ RL+ E+I+RM+ R+++ N LESYAYS+ N L D
Sbjct: 504 DKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDD 553
Score = 70.1 bits (164), Expect = 4e-13
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = +3
Query: 6 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINP 143
VL D+ ++K V+EIVLVGGSTRIP++Q+LV +FFNGKEP + INP
Sbjct: 318 VLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINP 363
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 162 bits (394), Expect = 5e-41
Identities = 81/170 (47%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Frame = +1
Query: 214 IVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEGERPMT 393
+VLLDV PL++GIET+GGV T+LI RNT IPT+KSQ+FSTA+D Q V I+V++GER +
Sbjct: 432 LVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELV 491
Query: 394 KDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAEDKGTGNREKIVITNDQNRL 573
+DN L+G F LTGI PAP+G PQIEV+F++DA+GI+ VSA DK T N++ + + L
Sbjct: 492 RDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKAT-NKDSSITVAGSSGL 550
Query: 574 TPEDIERMIXXXXXXXXXXXXXXXRVKSXNELESYAYSIXNQLQ-DKEKL 720
T +IE M+ +++ N ES I + L K+KL
Sbjct: 551 TDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKL 600
Score = 49.6 bits (113), Expect = 6e-07
Identities = 19/45 (42%), Positives = 34/45 (75%)
Frame = +3
Query: 9 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINP 143
L+DA++ +++E++LVGG TR+P+V + VK F +EP++ +NP
Sbjct: 367 LKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNP 410
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 142 bits (343), Expect = 8e-35
Identities = 72/168 (42%), Positives = 101/168 (60%)
Frame = +1
Query: 205 TDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEGER 384
T ++LLDV PL++G+ G V + PRNT IPT K + F+T +DNQ TVT VY+GER
Sbjct: 391 TQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGER 450
Query: 385 PMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAEDKGTGNREKIVITNDQ 564
+N LG+F LTGIPP PRG ++E TFE+DANGIL+V+A +K TG I ITN
Sbjct: 451 VNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSV 510
Query: 565 NRLTPEDIERMIXXXXXXXXXXXXXXXRVKSXNELESYAYSIXNQLQD 708
L+ I+ MI ++++ ++LESY +I + +
Sbjct: 511 GHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISE 558
Score = 62.1 bits (144), Expect = 1e-10
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = +3
Query: 6 VLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINP 143
VL+D+ + K DV +IVLVGGSTRIPKVQ+LV +FF+G+ ++ INP
Sbjct: 322 VLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINP 367
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 9 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGIN 140
LE A + K+D+ I +VGG TR+P V++++ +F GK S +N
Sbjct: 327 LELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLN 369
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 34.3 bits (75), Expect = 0.024
Identities = 12/44 (27%), Positives = 29/44 (65%)
Frame = +3
Query: 9 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGIN 140
L+ A++ +++ I+L GG++RIP +Q + ++ + + S+ +N
Sbjct: 355 LKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVN 398
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 33.1 bits (72), Expect = 0.055
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 9 LEDADMNKKDVDEIVLVGGSTRIPKVQQLVKEFF 110
+E A+M D+ E++L GG++ PK+ L++ F
Sbjct: 345 VEKANMEPFDISEVILAGGASNTPKLTSLMESIF 378
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = -3
Query: 530 PVPLSSADTCKIPLAS----ISNVTSICGIPRGAGGIP 429
PVPL SAD IP+ S + TS +P+ + G P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAP 1060
>SPAC1783.04c |hst4||Sir2 family histone deacetylase
Hst4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 30 KKDVDEIVLVGGSTRIPKVQQLVKEFFNGKEPSRG 134
K D +++ G S +IP V++++KE N +G
Sbjct: 263 KSRPDCLIVAGTSCKIPGVKRIIKEMSNCVHKQKG 297
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +1
Query: 229 VNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTASDNQHTVTIQVYEGERPMTKDNHL 408
+NP+T + + V+ +I VIP +K + ST + + + + G + +N+
Sbjct: 641 LNPITNILRVIQKVIQFIISAEFVIPAQKLEAISTLVEKEFHSVVYHFIGIQRSLYENYA 700
Query: 409 LG 414
G
Sbjct: 701 QG 702
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,918,294
Number of Sequences: 5004
Number of extensions: 55511
Number of successful extensions: 187
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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