Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_B10
         (846 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          211   6e-55
11_01_0155 - 1287003-1287452                                          211   6e-55
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539...    37   0.023
07_03_0227 - 15398371-15398925                                         30   2.0  

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  211 bits (515), Expect = 6e-55
 Identities = 94/143 (65%), Positives = 118/143 (82%)
 Frame = +1

Query: 46  REPIQAVQVFGGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 225
           R P   VQ FG KKTA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +F
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 226 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 405
             +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 406 PRRCEPKKFGGPGARARYQKSYR 474
           PRRCEPKKFGG GARAR+QKSYR
Sbjct: 127 PRRCEPKKFGGRGARARFQKSYR 149


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  211 bits (515), Expect = 6e-55
 Identities = 94/143 (65%), Positives = 118/143 (82%)
 Frame = +1

Query: 46  REPIQAVQVFGGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 225
           R P   VQ FG KKTA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+ +F
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 226 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 405
             +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKKE+KDI  +YDR+LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 406 PRRCEPKKFGGPGARARYQKSYR 474
           PRRCEPKKFGG GARAR+QKSYR
Sbjct: 127 PRRCEPKKFGGRGARARFQKSYR 149


>07_03_1553 -
           27653473-27653490,27653634-27653673,27653852-27653939,
           27654150-27654230,27654644-27655084,27655692-27656325
          Length = 433

 Score = 36.7 bits (81), Expect = 0.023
 Identities = 26/79 (32%), Positives = 37/79 (46%)
 Frame = +1

Query: 76  GGKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVK 255
           G +K + A  + + G G   VN +  D   P +L ++          +     D+  TVK
Sbjct: 295 GKRKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTVK 353

Query: 256 GGGHVAQVYAIRQAISKAL 312
           GGG   QV AIR  IS+AL
Sbjct: 354 GGGVSGQVGAIRLGISRAL 372


>07_03_0227 - 15398371-15398925
          Length = 184

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -3

Query: 196 VPEVCTAAVWAQPSPMGARLHAAFH--DHACNTQLRWRF 86
           +P +C A  W  P+   A  H  FH     C+ + RW +
Sbjct: 23  LPPLCRAPWWPSPASSAAATHLRFHPRHRRCHPRRRWSY 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,884,991
Number of Sequences: 37544
Number of extensions: 498561
Number of successful extensions: 1285
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)