Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_B05
(923 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0134 - 1628822-1628927,1628944-1629074 32 0.74
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 31 0.98
01_01_0545 - 4002659-4003307,4003415-4003887 31 0.98
05_07_0105 - 27716126-27716218,27716548-27716658,27716764-277168... 31 1.7
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519... 30 3.0
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 30 3.0
04_03_0149 + 11873854-11874135,11874938-11875033 29 3.9
01_01_1049 + 8275837-8275859,8276428-8276503,8276545-8276634,827... 29 3.9
12_01_0288 - 2160981-2161076,2161150-2161236,2161333-2161419,216... 29 5.2
01_06_1120 - 34645676-34645768,34645880-34645966,34646443-346465... 29 5.2
01_01_0650 - 4948852-4950012 29 5.2
05_05_0290 - 23879064-23880035 29 6.9
11_06_0610 - 25449085-25453284 28 9.1
10_08_0949 - 21759821-21759833,21759985-21760301,21760650-217607... 28 9.1
08_01_0394 - 3487360-3488229 28 9.1
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349... 28 9.1
01_01_0274 - 2263304-2264211,2264490-2264673 28 9.1
>10_01_0134 - 1628822-1628927,1628944-1629074
Length = 78
Score = 31.9 bits (69), Expect = 0.74
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 810 AHEPGKHVRHDVTVQVGITSTSNLEGVLHHV 718
A PGK +R+ + +VG T + EGVLHH+
Sbjct: 2 AGTPGKRLRYTASRRVGSTLSDLPEGVLHHI 32
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 31.5 bits (68), Expect = 0.98
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -3
Query: 624 HTHNISFVYGRDLLPLVFSGELEGELR--HSRTGLLRDQLD 508
HTHNIS V LP++ +G +G +R HS T L + L+
Sbjct: 223 HTHNISAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLN 263
>01_01_0545 - 4002659-4003307,4003415-4003887
Length = 373
Score = 31.5 bits (68), Expect = 0.98
Identities = 24/98 (24%), Positives = 43/98 (43%)
Frame = +3
Query: 111 LIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIPQKAIDSVNANKIGL 290
L+ GHG+ + V++ A+V + AVRGP G I S + +
Sbjct: 72 LLVGHGVPAALLSRVEE--RVARVFSLPASEKMRAVRGPGEPCGYGSPPISSFFSKLMWS 129
Query: 291 KGPLXDSSR*RLQITQLGPQEGV*LVC*CQTLQEFRRD 404
+G S R ++ +L P+ G + C ++EF ++
Sbjct: 130 EGYTFSPSSLRSELRRLWPKSGDDYLLFCDVMEEFHKE 167
>05_07_0105 -
27716126-27716218,27716548-27716658,27716764-27716815,
27716895-27717034,27717298-27717422,27717514-27717638,
27717853-27717898,27718374-27718947
Length = 421
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 397 EGIKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEA-STRVAEFAFQFARE 573
E ++ L + D+V N +G+ IE EI+DGVV +++ + ST V + A +
Sbjct: 255 EALQKLNKHYDIVV---NIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTALKPEDASD 311
Query: 574 NKRKKVTAVHKANIMRMSDGL 636
R K ++ + S GL
Sbjct: 312 TNRVKCVLDNQGYAIYFSRGL 332
>09_03_0058 + 11950668-11950701,11951068-11951106,11951586-11951982,
11952016-11952314,11953743-11956795
Length = 1273
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 674 RTSSLKSDTWTRSASTWCRTPSKFDVLVMPTC 769
R+SS+ + T+ + TWCR+ + D + P C
Sbjct: 1091 RSSSVSFQSLTKLSITWCRSLTSLDNFLQPEC 1122
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -1
Query: 767 RXASPARQTWRGSCTMLRQTVSRYRSSNLMSGYLVASSRQQRRKRPSDIRIILALCTAVT 588
R P T G+C+ V + + + +L+ S ++Q + IRII +C+A+
Sbjct: 525 RVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARIRIIAEICSALI 584
Query: 587 F 585
F
Sbjct: 585 F 585
>04_03_0149 + 11873854-11874135,11874938-11875033
Length = 125
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -1
Query: 398 SKLLQGLTLAYKSNSFLRAKLSDL*PLPTGVXQGTLQANFIGIYRVNRFLRNTEFAIWTP 219
S LL+G+ L + + KLS P+P G+ + +N ++ V+ + ++TE W
Sbjct: 63 SMLLEGVYLIREGVCLIHGKLSCPGPIPNGI--SLIASNLRVLFGVSSWQQSTEILAWDE 120
Query: 218 NS 213
S
Sbjct: 121 GS 122
>01_01_1049 +
8275837-8275859,8276428-8276503,8276545-8276634,
8276721-8276836,8276918-8277017,8277808-8277879,
8277954-8278001,8278093-8278170,8278272-8278391,
8278496-8278601,8279574-8279737,8280403-8280537,
8280766-8280896,8282016-8282094,8282284-8282373
Length = 475
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 513 LDGLHDPVDDLVLDTGILTLGVLSDRDHINVV 418
L G+ PVDDL D ++ G++ D+D N+V
Sbjct: 47 LKGMGFPVDDLEFDPDLVIRGLIMDKDKGNLV 78
>12_01_0288 -
2160981-2161076,2161150-2161236,2161333-2161419,
2161641-2161726,2161805-2161908,2162618-2162704,
2162790-2162913,2163058-2163176,2163268-2163397,
2163583-2163671,2163804-2163892,2164579-2164672,
2164778-2164857,2164952-2165041,2166307-2166393,
2166495-2166539,2166966-2167042,2167120-2167225,
2167383-2167464,2167553-2167624,2168106-2168183,
2168259-2168349,2168826-2168979
Length = 717
Score = 29.1 bits (62), Expect = 5.2
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -1
Query: 467 EYSPSVFSLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLRAKLSDL*PLPTGVXQGTLQ 288
EY+ S+ + + YS ++P KL G Y+S ++ L + P GTL
Sbjct: 48 EYAHVYNSMCIASPVQGYSAVLPEKLQTGKWNVYRS---AKSPLKLINRFPDNPDIGTLH 104
Query: 287 ANFIGIYRVNRF 252
NF +Y V F
Sbjct: 105 DNF--VYAVETF 114
>01_06_1120 -
34645676-34645768,34645880-34645966,34646443-34646508,
34647126-34647215,34647317-34647397,34647598-34647675,
34647788-34647878,34647969-34648110,34648479-34648590
Length = 279
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -1
Query: 239 EFAIWTPNSCYIHFLPFDRYFSCFEDFLNGDRDLGPNTMSRDERNLAHASAVLSSAGSGR 60
+FA+ TP S + LP ++ SC G+ + P T + + +L H V+ GR
Sbjct: 64 KFALPTPTS--VLGLPIGQHISCRGQDATGEEVIKPYTPTTLDSDLGHFELVIKMYPQGR 121
Query: 59 W-HNFPDYSCSHFKNFR 12
H+F + + + +
Sbjct: 122 MSHHFREMKVGDYMSVK 138
>01_01_0650 - 4948852-4950012
Length = 386
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 833 PEGVRPSPPTSPENMSDMMSPYRXASPARQTWRGSCTMLRQTVSRYRSSNL 681
P SPP SP + S +SP A+ R +W G + + ++ +R L
Sbjct: 222 PTSTLMSPPKSPPSESPPLSPDGAAAIRRGSWPGVGSPVNDVLASFRQLRL 272
>05_05_0290 - 23879064-23880035
Length = 323
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 564 ELEGELR-HSRTGLLRDQLDGLHDPV-DDLVLDTGIL 460
E EG +R H R LR LD +HD + DD D+ IL
Sbjct: 81 EFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSIL 117
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -1
Query: 875 PGXXSKGXPFXPMLPEGVRPSPPTS--PENMSDMMSPYRXASP 753
P S+ P PEG PSPP S PE S + P SP
Sbjct: 718 PTPESEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSP 760
>10_08_0949 -
21759821-21759833,21759985-21760301,21760650-21760728,
21760816-21760912,21761305-21761410
Length = 203
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 257 RFLRNTEFAIWTPNSCYIHFLPFDRYF 177
RFL EF N YIH+L +RYF
Sbjct: 17 RFLLELEFIQCLANPTYIHYLAQNRYF 43
>08_01_0394 - 3487360-3488229
Length = 289
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 784 SDMFSGLVGG---LGLTPSGNIGKNGXPFXXXPGTXPNSPV 897
SD G GG LG+ PSG G PF P P PV
Sbjct: 232 SDQGGGGSGGMPPLGVDPSGGAATGGLPFFNMPFGMPPMPV 272
>07_01_0461 +
3492302-3492413,3492868-3492964,3493053-3493131,
3493484-3493794,3494219-3494231
Length = 203
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 257 RFLRNTEFAIWTPNSCYIHFLPFDRYF 177
RFL EF N YIH+L +RYF
Sbjct: 19 RFLLELEFIQCLANPTYIHYLAQNRYF 45
>01_01_0274 - 2263304-2264211,2264490-2264673
Length = 363
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 534 TGLLRDQLDGLHDPVDDLVLDTGILTLGV 448
TGLL ++GL D VDDLV L +GV
Sbjct: 214 TGLLCAGMEGLDDGVDDLVAGIDDLEVGV 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,658,508
Number of Sequences: 37544
Number of extensions: 535397
Number of successful extensions: 1934
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1934
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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