Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_B05
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical pr... 301 6e-82
Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical pr... 176 2e-44
AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical ... 176 2e-44
Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical pr... 162 4e-40
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 29 4.7
AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical ... 29 6.2
>Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical
protein F43G9.1 protein.
Length = 358
Score = 301 bits (738), Expect = 6e-82
Identities = 148/203 (72%), Positives = 163/203 (80%)
Frame = +1
Query: 280 KLA*RVPXMTPVGKGYRSLNLALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTIRENTEG 459
K+ + P TP+GKG+RSLNLA+RKEF LYANVRPC+SLEG KTLYDNVDVVTIRENTEG
Sbjct: 85 KVGLKGPLETPIGKGHRSLNLAVRKEFSLYANVRPCRSLEGHKTLYDNVDVVTIRENTEG 144
Query: 460 EYSGIEHEIVDGVVQSIKLITEEASTRVAEFAFQFARENKRKKVTAVHKANIMRMSDGLF 639
EYSGIEHEIV GVVQSIKLITE AS VA FAF++AR+N RK VTAVHKANIMR SDGLF
Sbjct: 145 EYSGIEHEIVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTAVHKANIMRQSDGLF 204
Query: 640 LRCCRELATKYPDIKFEERYLDTVCLNMVQDPLQV*RAGDAXLYGDIMSDMFSGLVGGLG 819
L CRE A YPDIKF+E YLDTVCLNMVQDP Q LYGDI+SD+ +GLVGGLG
Sbjct: 205 LSICREQAALYPDIKFKEAYLDTVCLNMVQDPSQYDVLVMPNLYGDILSDLCAGLVGGLG 264
Query: 820 LTPSGNIGKNGXPFXXXPGTXPN 888
+TPSGNIGK F GT P+
Sbjct: 265 VTPSGNIGKGAAVFESVHGTAPD 287
Score = 107 bits (256), Expect = 1e-23
Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +3
Query: 27 MAARIIRKIVPATRAGAAQYSTG-VRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEV 203
M + I+K +T + +YS+G VR+VTLIPG GIGPEI+ +VQKIFEAA PI W+ V
Sbjct: 1 MLGKCIKK-ASSTVGQSIRYSSGDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPV 59
Query: 204 DVTAVRGPDGKFGIPQKAIDSVNANKIGLKGPL 302
DVT V+G DG F IP + I+ ++ANK+GLKGPL
Sbjct: 60 DVTPVKGRDGVFRIPSRCIELMHANKVGLKGPL 92
>Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical
protein C37E2.1 protein.
Length = 379
Score = 176 bits (429), Expect = 2e-44
Identities = 82/175 (46%), Positives = 120/175 (68%), Gaps = 1/175 (0%)
Frame = +1
Query: 328 RSLNLALRKEFDLYANVRPCKSLEGIKTLYDN-VDVVTIRENTEGEYSGIEHEIVDGVVQ 504
+ LN+ LR+ DL+ANV K+L+GIKT + +D V +RE TEGEYS +EHE+V GV++
Sbjct: 122 QGLNMRLRRSLDLFANVVHIKTLDGIKTRHGKQLDFVIVREQTEGEYSSLEHELVPGVIE 181
Query: 505 SIKLITEEASTRVAEFAFQFARENKRKKVTAVHKANIMRMSDGLFLRCCRELATKYPDIK 684
+K+ T + R+A+FAF +A + RKKVTAVHKANIM++ DGLFLR C +A +YP I+
Sbjct: 182 CLKISTRTKAERIAKFAFDYATKTGRKKVTAVHKANIMKLGDGLFLRTCEGVAKQYPKIQ 241
Query: 685 FEERYLDTVCLNMVQDPLQV*RAGDAXLYGDIMSDMFSGLVGGLGLTPSGNIGKN 849
FE +D C+ +V P Q LYG+I+ ++ +GLVGG G+ P ++G++
Sbjct: 242 FESMIIDNTCMQLVSKPEQFDVMVMPNLYGNIIDNLAAGLVGGAGVVPGQSVGRD 296
Score = 51.6 bits (118), Expect = 8e-07
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +3
Query: 102 KVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIPQKAIDSVNA-N 278
KVT+IPG G+GPE+ VQ I + +PIE+EE+ ++ V + + A++S+ N
Sbjct: 44 KVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYT--RSSSIENAVESIGRNN 101
Query: 279 KIGLKGPLXDSS 314
+ LKG + +S+
Sbjct: 102 NVALKGAIEESA 113
>AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical
protein C30F12.7 protein.
Length = 373
Score = 176 bits (428), Expect = 2e-44
Identities = 82/173 (47%), Positives = 116/173 (67%)
Frame = +1
Query: 325 YRSLNLALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQ 504
+ S N+ LR + DLYAN+ C ++ + T + +D+V IRENTEGEYSG+EHE V G+V+
Sbjct: 108 FNSRNVELRTKLDLYANILHCVTIPTVPTRHSGIDIVLIRENTEGEYSGLEHEAVPGIVE 167
Query: 505 SIKLITEEASTRVAEFAFQFARENKRKKVTAVHKANIMRMSDGLFLRCCRELATKYPDIK 684
SIK++T E R++ AF++A+ N RKKVTAVHKANI ++ DGLFL+ R+++ Y DIK
Sbjct: 168 SIKIVTREKIERISRMAFEYAKANGRKKVTAVHKANIQKLGDGLFLKVVRDMSEDYKDIK 227
Query: 685 FEERYLDTVCLNMVQDPLQV*RAGDAXLYGDIMSDMFSGLVGGLGLTPSGNIG 843
FE +D + +V P Q LYG+I+S++ GLVGG GL N+G
Sbjct: 228 FEAMIVDNASMQLVSKPQQFDVMVMPNLYGNIISNIACGLVGGPGLVSGMNLG 280
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +3
Query: 54 VPATRAGAAQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDG 233
+P R A+Y G V +PG GIGPE+ ++ IF P+ +EEV V++ DG
Sbjct: 22 IPGHRLPLAKYG-GRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVSSSL-LDG 79
Query: 234 KFGIPQKAIDSVNANKIGLKG 296
AI+ N + +KG
Sbjct: 80 DMDAAMLAIE---RNGVAIKG 97
>Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical
protein F35G12.2 protein.
Length = 396
Score = 162 bits (393), Expect = 4e-40
Identities = 83/178 (46%), Positives = 118/178 (66%), Gaps = 5/178 (2%)
Frame = +1
Query: 331 SLNLALRKEFDLYANVRPCKSLEGIKTLYDNVDVVTIRENTEGEYSGIEHEIVDG----V 498
S NL LR++ +LYANV C ++ + + + +D+V IRENTEGEYSG EHE V+ V
Sbjct: 127 SRNLELRRQLNLYANVLHCSTIPTVPSRHTGIDMVIIRENTEGEYSGNEHEAVNAPHPRV 186
Query: 499 VQSIKLITEEASTRVAEFAFQFARENKRKKVTAVHKANIMRMSDGLFLRCCRELA-TKYP 675
V+S+K++T E S ++ FAFQFA++ RKKVTAVHKANI ++ DGLFL+ ++A +YP
Sbjct: 187 VESLKVVTREKSEQITRFAFQFAKKYGRKKVTAVHKANIQKLGDGLFLKVATDIAKAEYP 246
Query: 676 DIKFEERYLDTVCLNMVQDPLQV*RAGDAXLYGDIMSDMFSGLVGGLGLTPSGNIGKN 849
DI+F +D + +V P Q LYG+I+S++ GLVGG GL NIG++
Sbjct: 247 DIEFNAMIVDNASMQLVSRPQQFDVMLMPNLYGNIISNIACGLVGGPGLVSGMNIGED 304
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +3
Query: 78 AQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIPQKA 257
A+Y G VT++PG GIGPE+ V++I A + P+++E V++T+ +A
Sbjct: 46 ARYG-GRHNVTVLPGDGIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDASEDLA---EA 101
Query: 258 IDSVNANKIGLKG 296
I ++ N + LKG
Sbjct: 102 ITAIKRNGVALKG 114
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -3
Query: 507 GLHDPVDDLVLDTGILTLGVLSDRDHINVVV 415
G+H+P+D ++++T + +G RD + VV
Sbjct: 292 GVHEPIDTILINTDVQIIGASDSRDITSSVV 322
>AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical
protein C16A11.3 protein.
Length = 726
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +1
Query: 454 EGEYSGIEHEIVD--GVVQSIKLITEEASTRVAEFAFQFARENK-RKKVTAVHKANIMRM 624
EG + + +++VD ++KL EE S V E ++ ARE K VTA++ AN++RM
Sbjct: 398 EGVFGAV-YKVVDHSNKKYAVKLFKEEHS-EVGEQSW--ARETAIMKAVTAINSANLIRM 453
Query: 625 SD 630
D
Sbjct: 454 ED 455
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,967,995
Number of Sequences: 27780
Number of extensions: 426411
Number of successful extensions: 1580
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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