Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_B04
(843 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 54 1e-09
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 47 2e-07
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 47 2e-07
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 47 2e-07
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 26 0.50
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 25 1.2
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.7
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.5
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 6.2
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 6.2
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 8.1
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 54.4 bits (125), Expect = 1e-09
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 612 TLDEFKILFNKIKKIGIRVIVDLIPNYVXPNHTWFVQSENSTXPYTDYFIWTRXNLLXG 788
TL +F L + K +G++VI+D +PN+ H WF +S PY +Y++W ++ G
Sbjct: 98 TLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQRIKPYDEYYVWRDARIVNG 156
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 47.2 bits (107), Expect = 2e-07
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 612 TLDEFKILFNKIKKIGIRVIVDLIPNYVXPNHTWFVQSENSTXPYTDYFIWTRXNLLXG 788
T+ + L + + G+++I+D +PN+ H WF S + PY +Y+IW ++ G
Sbjct: 98 TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNG 156
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 47.2 bits (107), Expect = 2e-07
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 612 TLDEFKILFNKIKKIGIRVIVDLIPNYVXPNHTWFVQSENSTXPYTDYFIWTRXNLLXG 788
T+ + L + + G+++I+D +PN+ H WF S + PY +Y+IW ++ G
Sbjct: 98 TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNG 156
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 46.8 bits (106), Expect = 2e-07
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = +3
Query: 612 TLDEFKILFNKIKKIGIRVIVDLIPNYVXPNHTWFVQS-----ENSTXPYTDYFIW 764
T+ + + L + KK ++VI+DL+PN+ H WF S N+T Y DY+IW
Sbjct: 96 TIKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIW 151
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 25.8 bits (54), Expect = 0.50
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 378 WVAWLCMLAGAIAVIVRAPKCGPPEPRTWY-ELGPLVGLDLVD 503
WV C I VI++ P CGP ++ +L PL L D
Sbjct: 9 WVGGFCHSIIQIPVIIQLPFCGPNVIDHYFRDLQPLFKLACTD 51
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 364 YSCCSGWPGCA-CSPGLLQSLYAHPSA 441
+S CS P A S G L +Y HPSA
Sbjct: 117 FSTCSSHPTAAFISYGTLFFIYVHPSA 143
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 325 YFSTSSLVIPVNCRLLASSSIFASPFLWSPTTYFASDMST 206
Y+ L +L S FA +W P T+FA+D ++
Sbjct: 91 YWKDERLAFSQEEEVLTLSGDFAEK-IWVPDTFFANDKNS 129
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 666 VIVDLIPNYVXPNHTWFVQS 725
VIVD+IP P W+V S
Sbjct: 581 VIVDVIPTDKNPVQLWYVPS 600
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 309 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 434
E+ K +D W + L LF W+ L +L G +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 309 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 434
E+ K +D W + L LF W+ L +L G +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 3.5
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -3
Query: 436 LGARTMTAIAPASMHSQATQNNTNSDQRKFT---QKGSSAYFSTSSLVIPVNCRLLASSS 266
LG T P S + NN R T K S A+ SS + + R
Sbjct: 451 LGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARR---EGI 507
Query: 265 IFASPFLWSPTTYFASDM 212
A+PF SPTT+ +D+
Sbjct: 508 RLAAPFNASPTTWSPADL 525
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 6.2
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = -3
Query: 262 FASPFLWSPTTYFASDMSTRV 200
F +W+PT Y +++ S+ +
Sbjct: 92 FVRDLIWTPTVYVSNEPSSAI 112
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.2 bits (45), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 478 PWSDWTWSMPSN 513
P+ DWTW+ N
Sbjct: 104 PYPDWTWAKNEN 115
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 369 VLFWVAWLCMLAGAIAVIVRAP 434
+ WV L AG + +I +AP
Sbjct: 484 LFLWVFTLACTAGTLGIIFQAP 505
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,024
Number of Sequences: 438
Number of extensions: 4520
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -