Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_B03
(850 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 37 0.080
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 33 0.99
Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protei... 33 1.3
CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein. 33 1.3
BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein. 33 1.3
BC127948-1|AAI27949.1| 353|Homo sapiens Unknown (protein for MG... 32 3.0
BC127947-1|AAI27948.1| 271|Homo sapiens Unknown (protein for MG... 32 3.0
AJ537424-1|CAD60934.1| 455|Homo sapiens growth/differentiation ... 32 3.0
BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein. 31 4.0
AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence si... 31 4.0
AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence si... 31 4.0
AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein pr... 31 4.0
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon... 31 5.3
AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein pr... 31 5.3
AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy ch... 31 5.3
AF000936-1|AAB59973.1| 561|Homo sapiens SH3 binding protein 2 p... 31 5.3
D26579-1|BAA05626.1| 824|Homo sapiens transmembrane protein pro... 31 7.0
BC115404-1|AAI15405.1| 824|Homo sapiens ADAM8 protein protein. 31 7.0
BC111390-1|AAI11391.1| 384|Homo sapiens SRY (sex determining re... 31 7.0
BC073971-1|AAH73971.1| 384|Homo sapiens SRY (sex determining re... 31 7.0
BC038590-1|AAH38590.1| 384|Homo sapiens SRY (sex determining re... 31 7.0
AL355803-1|CAC16611.1| 384|Homo sapiens SRY (sex determining re... 31 7.0
AJ243896-1|CAB95835.1| 384|Homo sapiens SOX18 protein protein. 31 7.0
AF270652-1|AAG48577.1| 384|Homo sapiens Sry-related HMG-box pro... 31 7.0
AB033888-1|BAA94874.1| 384|Homo sapiens SOX18 protein. 31 7.0
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 30 9.2
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 30 9.2
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 37.1 bits (82), Expect = 0.080
Identities = 47/147 (31%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Frame = +3
Query: 57 PVTSQPES--RKAPP--SPRYYSVCISTIYPGLRRPIWRSSPMTPPSTT--RVGRRRCFI 218
P + P + R+ PP SPR S P R P R P PP+ T R
Sbjct: 45 PTRTPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTASPARTPP 104
Query: 219 DDFRPQLPPWDSGSGS---GASTLTPRKA--QRCSSKGVALRTPR*ASLSRL--GASITP 377
+ + PP S + + + T TP +A +R S RTP AS R AS T
Sbjct: 105 TESPARTPPTASPARTPPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASPTR 164
Query: 378 PPPFAQSRCSTSPYRGPRRSNI*ASPS 458
PP A + T P PRR+ ASP+
Sbjct: 165 TPPRASPK-RTPPRASPRRTPPRASPT 190
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 33.5 bits (73), Expect = 0.99
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 255 GSGSGASTLTPRKAQRCSSKGVALRTPR*ASL---SRLGASITPPPPFAQSRCSTSPYRG 425
G G G + +PR+ R S+G + R S SR G S P+++SR S SPY
Sbjct: 111 GGGYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYGRSPYSRSPYSRSRYSRSPYSR 170
Query: 426 PR 431
R
Sbjct: 171 SR 172
>Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protein 1
protein.
Length = 701
Score = 33.1 bits (72), Expect = 1.3
Identities = 38/120 (31%), Positives = 45/120 (37%), Gaps = 8/120 (6%)
Frame = +3
Query: 48 VPGPVTSQ-PESRKAP-PSPRYYSVCI-----STIYPGLRRP-IWRSSPMTPPSTTRVGR 203
VP P T+ P AP P+P S S + P P + RS P T + R
Sbjct: 504 VPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMAR 563
Query: 204 RRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPP 383
R RP +PP SGS +S P S G PR S L A PPP
Sbjct: 564 RTKRPAPARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPP 622
>CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein.
Length = 701
Score = 33.1 bits (72), Expect = 1.3
Identities = 38/120 (31%), Positives = 45/120 (37%), Gaps = 8/120 (6%)
Frame = +3
Query: 48 VPGPVTSQ-PESRKAP-PSPRYYSVCI-----STIYPGLRRP-IWRSSPMTPPSTTRVGR 203
VP P T+ P AP P+P S S + P P + RS P T + R
Sbjct: 504 VPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMAR 563
Query: 204 RRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPP 383
R RP +PP SGS +S P S G PR S L A PPP
Sbjct: 564 RTKRPAPARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPP 622
>BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein.
Length = 621
Score = 33.1 bits (72), Expect = 1.3
Identities = 38/120 (31%), Positives = 45/120 (37%), Gaps = 8/120 (6%)
Frame = +3
Query: 48 VPGPVTSQ-PESRKAP-PSPRYYSVCI-----STIYPGLRRP-IWRSSPMTPPSTTRVGR 203
VP P T+ P AP P+P S S + P P + RS P T + R
Sbjct: 424 VPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMAR 483
Query: 204 RRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPP 383
R RP +PP SGS +S P S G PR S L A PPP
Sbjct: 484 RTKRPAPARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPP 542
>BC127948-1|AAI27949.1| 353|Homo sapiens Unknown (protein for
MGC:158101) protein.
Length = 353
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +3
Query: 186 TTRVGRRRCFIDDFRPQLPPWDSGSGSGAST---LTPRKAQRCSSKGVALRTPR*ASLSR 356
T RV F+ F LP + S S +S+ L K R +G R PR + R
Sbjct: 3 TPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDAGR 62
Query: 357 LGASITPPP---PFAQS-RCSTSPYRGPR 431
G P P P AQ R P RGPR
Sbjct: 63 EGQEPQPRPQDEPRAQQPRAQEPPGRGPR 91
>BC127947-1|AAI27948.1| 271|Homo sapiens Unknown (protein for
MGC:158100) protein.
Length = 271
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +3
Query: 186 TTRVGRRRCFIDDFRPQLPPWDSGSGSGAST---LTPRKAQRCSSKGVALRTPR*ASLSR 356
T RV F+ F LP + S S +S+ L K R +G R PR + R
Sbjct: 3 TPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDAGR 62
Query: 357 LGASITPPP---PFAQS-RCSTSPYRGPR 431
G P P P AQ R P RGPR
Sbjct: 63 EGQEPQPRPQDEPRAQQPRAQEPPGRGPR 91
>AJ537424-1|CAD60934.1| 455|Homo sapiens growth/differentiation
factor 6 precursor protein.
Length = 455
Score = 31.9 bits (69), Expect = 3.0
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +3
Query: 186 TTRVGRRRCFIDDFRPQLPPWDSGSGSGAST---LTPRKAQRCSSKGVALRTPR*ASLSR 356
T RV F+ F LP + S S +S+ L K R +G R PR + R
Sbjct: 3 TPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDAGR 62
Query: 357 LGASITPPP---PFAQS-RCSTSPYRGPR 431
G P P P AQ R P RGPR
Sbjct: 63 EGQEPQPRPQDEPRAQQPRAQEPPGRGPR 91
>BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein.
Length = 755
Score = 31.5 bits (68), Expect = 4.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 260 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 430
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 650 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 708
Query: 431 KVKYLG 448
K + G
Sbjct: 709 KTPHPG 714
>AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence
similarity 22, member F protein.
Length = 655
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 260 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 385
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 549 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 590
>AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence
similarity 22, member G protein.
Length = 622
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 260 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 385
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 516 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 557
>AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 31.5 bits (68), Expect = 4.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 260 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 430
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 508 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 566
Query: 431 KVKYLG 448
K + G
Sbjct: 567 KTPHPG 572
>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
variant protein.
Length = 1751
Score = 31.1 bits (67), Expect = 5.3
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +3
Query: 135 PGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKA---QRC 305
P L RP W +P+T PS R + PPW S + L+P A Q+
Sbjct: 196 PSLGRP-W--APLTGPSVPPPSSGRASLSSLLGGAPPWGSLQDPDSQGLSPAAAAPSQQL 252
Query: 306 SSKGVALRTP 335
V LRTP
Sbjct: 253 QRPDVRLRTP 262
>AL117481-1|CAB55954.1| 319|Homo sapiens hypothetical protein
protein.
Length = 319
Score = 31.1 bits (67), Expect = 5.3
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Frame = +3
Query: 159 RSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQ--RCSSKGVALRT 332
R+SPMTPP + P+ PP + T TP +A R S T
Sbjct: 9 RASPMTPPRAS-------------PRTPP------RASPTTTPSRASLTRTPSWASPTTT 49
Query: 333 PR*ASLSRLGA--SITPPPPFAQ---SRCSTSPYRGPRRSNI*ASPSXSRMTFRP 482
P ASL ++ + SIT PP A + SP P R+++ SPS + +T P
Sbjct: 50 PSRASLMKMESTVSITRTPPRASPTGTPSRASPTGTPSRASLTGSPSRASLTGTP 104
>AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 133
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 161 LFADDTAIYYSCRKKALLHRRLQTAATTM-GQWFRKW 268
L +DDTA+YY R + + H + T G WF W
Sbjct: 86 LRSDDTAVYYCARDQGIPHYDFWSGITPEDGDWFDPW 122
>AF000936-1|AAB59973.1| 561|Homo sapiens SH3 binding protein 2
protein.
Length = 561
Score = 31.1 bits (67), Expect = 5.3
Identities = 32/117 (27%), Positives = 45/117 (38%), Gaps = 5/117 (4%)
Frame = +3
Query: 51 PGPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPP-ST--TRVGRRR--CF 215
P P P+ +AP + +C P R P PP ST T G R+ CF
Sbjct: 238 PPPKHGLPDVGRAPEDSKRDPLCPRRAEPCPRVPATPRRMSDPPLSTMPTAPGLRKPPCF 297
Query: 216 IDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPP 386
+ P PW G G+ +++ A S L++ LS G + PPP
Sbjct: 298 RESASPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKS---FHLSPRGPPTSEPPP 351
>D26579-1|BAA05626.1| 824|Homo sapiens transmembrane protein
protein.
Length = 824
Score = 30.7 bits (66), Expect = 7.0
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 54 GPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTP-PSTTRVGRRRCFIDDFR 230
GP P + P+ R+ + ++ P P+ SSP P P TR ++ F
Sbjct: 722 GPQELVPTTHPGQPA-RHPASSVALKRPPPAPPVTVSSPPFPVPVYTRQAPKQVIKPTFA 780
Query: 231 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP 335
P +PP G+G+ P A+ VAL+ P
Sbjct: 781 PPVPPVKPGAGAA----NPGPAEGAVGPKVALKPP 811
>BC115404-1|AAI15405.1| 824|Homo sapiens ADAM8 protein protein.
Length = 824
Score = 30.7 bits (66), Expect = 7.0
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 54 GPVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTP-PSTTRVGRRRCFIDDFR 230
GP P + P+ R+ + ++ P P+ SSP P P TR ++ F
Sbjct: 722 GPQELVPTTHPGQPA-RHPASSVALKRPPPAPPVTVSSPPFPVPVYTRQAPKQVIKPTFA 780
Query: 231 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP 335
P +PP G+G+ P A+ VAL+ P
Sbjct: 781 PPVPPVKPGAGAA----NPGPAEGAVGPKVALKPP 811
>BC111390-1|AAI11391.1| 384|Homo sapiens SRY (sex determining
region Y)-box 18 protein.
Length = 384
Score = 30.7 bits (66), Expect = 7.0
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 404
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 405 STSPYRGP 428
+ P+R P
Sbjct: 241 ALRPFRAP 248
>BC073971-1|AAH73971.1| 384|Homo sapiens SRY (sex determining
region Y)-box 18 protein.
Length = 384
Score = 30.7 bits (66), Expect = 7.0
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 404
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 405 STSPYRGP 428
+ P+R P
Sbjct: 241 ALRPFRAP 248
>BC038590-1|AAH38590.1| 384|Homo sapiens SRY (sex determining
region Y)-box 18 protein.
Length = 384
Score = 30.7 bits (66), Expect = 7.0
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 404
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 405 STSPYRGP 428
+ P+R P
Sbjct: 241 ALRPFRAP 248
>AL355803-1|CAC16611.1| 384|Homo sapiens SRY (sex determining
region Y)-box 18 protein.
Length = 384
Score = 30.7 bits (66), Expect = 7.0
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 404
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 405 STSPYRGP 428
+ P+R P
Sbjct: 241 ALRPFRAP 248
>AJ243896-1|CAB95835.1| 384|Homo sapiens SOX18 protein protein.
Length = 384
Score = 30.7 bits (66), Expect = 7.0
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 404
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 405 STSPYRGP 428
+ P+R P
Sbjct: 241 ALRPFRAP 248
>AF270652-1|AAG48577.1| 384|Homo sapiens Sry-related HMG-box
protein protein.
Length = 384
Score = 30.7 bits (66), Expect = 7.0
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 404
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 405 STSPYRGP 428
+ P+R P
Sbjct: 241 ALRPFRAP 248
>AB033888-1|BAA94874.1| 384|Homo sapiens SOX18 protein.
Length = 384
Score = 30.7 bits (66), Expect = 7.0
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 231 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 404
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 405 STSPYRGP 428
+ P+R P
Sbjct: 241 ALRPFRAP 248
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 30.3 bits (65), Expect = 9.2
Identities = 38/120 (31%), Positives = 45/120 (37%), Gaps = 8/120 (6%)
Frame = +3
Query: 48 VPGPVTSQ-PESRKAP-PSPRYYSVCI-----STIYPGLRRP-IWRSSPMTPPSTTRVGR 203
VP P T+ P AP P+P S S + P P + RS P T + R
Sbjct: 441 VPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMAR 500
Query: 204 RRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPP 383
R RP +PP SGS +S P S G PR S L A PPP
Sbjct: 501 RT------RPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPP 553
>AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ44762 fis, clone BRACE3031743, moderately
similar to Homo sapiens bruno-like 4, RNA binding
protein. ).
Length = 250
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 135 PGLR--RPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTL 281
PG R RP+W SS TP + R G ++ + PW S SG A TL
Sbjct: 199 PGRREPRPVWWSSSPTPTRSARCGECSRWLARWACS-TPWPSLSGPTAPTL 248
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,883,375
Number of Sequences: 237096
Number of extensions: 3464564
Number of successful extensions: 22104
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 20515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22087
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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