Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_B01
(809 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.15
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 29 1.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.0
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 2.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.2
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc... 27 4.2
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr... 27 4.2
SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces pom... 26 5.5
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 26 5.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 5.5
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 26 7.3
SPBC16G5.01 |rpn12|mts3, SPBC342.07|19S proteasome regulatory su... 25 9.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.15
Identities = 31/99 (31%), Positives = 36/99 (36%)
Frame = +1
Query: 295 VDIPTSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYV 474
V IPTS P P K+S + PVP P + P P P +P K V
Sbjct: 1043 VPIPTSTPPVP--KSSSGAPSAPPPVPAPSSEIPSIPAPSGAP-PVPAPSGIPPVPKPSV 1099
Query: 475 KVPVHVPAPYPVEKKVPYLVHVPVDRPYPXQGARAPALP 591
P VP P VP P P P AP +P
Sbjct: 1100 AAP-PVPKPSVAVPPVPAPSGAP---PVPKPSVAAPPVP 1134
Score = 29.9 bits (64), Expect = 0.45
Identities = 27/97 (27%), Positives = 36/97 (37%)
Frame = +1
Query: 304 PTSPRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVP 483
P++P P S + P A PVP K P P+ A P V P VP
Sbjct: 992 PSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAP-------PVP 1044
Query: 484 VHVPAPYPVEKKVPYLVHVPVDRPYPXQGARAPALPS 594
+ P PV K P P P + P++P+
Sbjct: 1045 IPTSTP-PVPKSSSGAPSAP--PPVPAPSSEIPSIPA 1078
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 28.7 bits (61), Expect = 1.0
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 7/101 (6%)
Frame = +1
Query: 322 SPSSKASLXPYAVDRP--VPYPVEKHVPYPV-KVAVPQPYEVVK----HVPYHVKEYVKV 480
SP+ S P++ P V P + P V P P + K +P + +
Sbjct: 106 SPAYTVSHSPHSFSNPRYVAVPQKSTSPNQVCSYCEPLPNHLTKTKSCSIPPILNSSDRS 165
Query: 481 PVHVPAPYPVEKKVPYLVHVPVDRPYPXQGARAPALPSREA 603
P+ +P PYPV+ PV P P APA PS E+
Sbjct: 166 PLSLPTPYPVQYSTQ-----PVSLPQP---IAAPAPPSAES 198
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +1
Query: 301 IPTSPRPSPSSKASLXPYA-VDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVK 477
+PT P PS+ SL P A P+ P +P +A P P + P
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Query: 478 VPVHVPAP 501
P PAP
Sbjct: 477 PPAPAPAP 484
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +1
Query: 367 PVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVHVPAPYPVEKKVPYLVHVP 543
P+ PV PY PQ V Y + P +VP YPV + PY + P
Sbjct: 381 PIQIPVSLQTPYGQVYGQPQYIVDPNMVQYGP---ILQPGYVPQYYPVYHQTPYTQNFP 436
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 400 YPVKVAVPQPYEVVKHVPYHVKEYVKV 480
Y +K+ VP P+ ++H P HV Y ++
Sbjct: 2322 YSLKLDVPLPFFALEHRPTHVISYTEL 2348
>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 131 QLCFLSSSSHWQPLLLPAGKLSRA 60
++ L WQP+L+P GK+ RA
Sbjct: 223 EMAHLLKDPIWQPILMPNGKVLRA 246
>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
glycotransferase subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +1
Query: 373 PYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYV-KVPVHVPAPYPVEKKVPYLVHVPVD 549
PY VP P Q YE V P H ++ K+ P P+E+K + +
Sbjct: 330 PYYRVNLVPVPSDSQTSQHYEAVLVAPDHYGDFTFKIEYKRPGLTPIEEKSTFTLRQFFH 389
Query: 550 RPYP 561
+P
Sbjct: 390 NEFP 393
>SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/53 (20%), Positives = 25/53 (47%)
Frame = +1
Query: 424 QPYEVVKHVPYHVKEYVKVPVHVPAPYPVEKKVPYLVHVPVDRPYPXQGARAP 582
+P E+V+++ Y + K + VP + + + H+P+ +P+ P
Sbjct: 283 RPVEIVQYLHYCIDLATKQSLQVPRLRTISALISSIQHLPLVQPHHMNDMHGP 335
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 26.2 bits (55), Expect = 5.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 370 VPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVK 477
+ YPV + P V V Q YEV V YH K+ +K
Sbjct: 304 ITYPVAETAPSLVVKVVNQDYEV--KVFYHYKDNIK 337
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 5.5
Identities = 24/83 (28%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Frame = +1
Query: 319 PSPSSKASLXPYAVDRPVPYPV--EKHVPYPVKVAVP--QPYEVVKHVPYHVKEYVKVPV 486
P P AS Y V P Y P+P P P V +VP
Sbjct: 104 PLPHDVASHPSYMVQSPTSYHACSNNQSPFPHSHHPPLHNPLPVSCQPVLRPPPVPQVPS 163
Query: 487 HVPAPYPVEKKVPYLVHVPVDRP 555
H YPV P L H P+ +P
Sbjct: 164 HW---YPVSLPSPNLPHQPISKP 183
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 313 PRPSPSSKASLXPYAVDRPVPYPVEKHVPYPVKV 414
P PS S+ +S+ P A V V + PYP ++
Sbjct: 216 PPPSDSANSSVTPIAAPLVVNGKVSGNPPYPAEI 249
>SPBC16G5.01 |rpn12|mts3, SPBC342.07|19S proteasome regulatory
subunit Rpn12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 270
Score = 25.4 bits (53), Expect = 9.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 473 LRFPSTFPRHTQSKRRCLISYTYQL 547
L P T +HT S R L+SYT +L
Sbjct: 242 LELPPTASKHTISSIRQLLSYTSEL 266
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,765,447
Number of Sequences: 5004
Number of extensions: 54416
Number of successful extensions: 186
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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