Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_B01
         (809 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.1  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    23   3.3  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    23   3.3  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    23   3.3  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    23   3.3  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    23   4.4  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   5.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = +1

Query: 373  PYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVHVPAPY 504
            P+     +P P  + +P   E + H+P+    +   P  +P+P+
Sbjct: 1131 PFTSPGGIPGPNGIKMPSFMEGMPHLPFTPFNFWNPPPFMPSPF 1174


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 454 YHVKEYVKVPVHVPAPYPV 510
           Y++    ++PV VP P PV
Sbjct: 103 YNINYIEQIPVPVPVPVPV 121


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 454 YHVKEYVKVPVHVPAPYPV 510
           Y++    ++PV VP P PV
Sbjct: 103 YNINYIEQIPVPVPVPVPV 121


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 454 YHVKEYVKVPVHVPAPYPV 510
           Y++    ++PV VP P PV
Sbjct: 103 YNINYIEQIPVPVPVPVPV 121


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 454 YHVKEYVKVPVHVPAPYPV 510
           Y++    ++PV VP P PV
Sbjct: 336 YNINYIEQIPVPVPVPVPV 354


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 454 YHVKEYVKVPVHVPAPYPV 510
           Y++    ++PV VP P PV
Sbjct: 103 YNINYIEQIPVPVPIPVPV 121


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +1

Query: 505 PVEKKVPYLVHVPVDRPYPXQGARAPALP 591
           P+   + Y+  +PV  P+P      P  P
Sbjct: 333 PLHYNINYIEQIPVPVPFPVYYGNFPPRP 361


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,290
Number of Sequences: 438
Number of extensions: 4885
Number of successful extensions: 45
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)