Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_A21
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 100 8e-21
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 100 8e-21
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 99 2e-20
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 48 4e-05
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 45 3e-04
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 40 0.015
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 40 0.015
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 40 0.015
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 100 bits (239), Expect = 8e-21
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = +2
Query: 296 KLALXYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEA 475
K YE + LG +H+LR + LTTK SSF I R + +G +S + RE + YT+E
Sbjct: 66 KAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEC 125
Query: 476 TQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYD--IISLPPQIRAVDLLHKAAYRRG 649
+ ++ +E L N+ + EFR WE+ D P+LK D + PQ ++ LH AAYR
Sbjct: 126 LRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYRNA 185
Query: 650 LGNSLFISPKRINDISSESLQPFCKPEHYS 739
L N L+ RI ++SE L F + H++
Sbjct: 186 LANPLYCPDYRIGKVTSEELHYFVQ-NHFT 214
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 100 bits (239), Expect = 8e-21
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = +2
Query: 296 KLALXYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEA 475
K YE + LG +H+LR + LTTK SSF I R + +G +S + RE + YT+E
Sbjct: 66 KAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEC 125
Query: 476 TQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYD--IISLPPQIRAVDLLHKAAYRRG 649
+ ++ +E L N+ + EFR WE+ D P+LK D + PQ ++ LH AAYR
Sbjct: 126 LRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYRNA 185
Query: 650 LGNSLFISPKRINDISSESLQPFCKPEHYS 739
L N L+ RI ++SE L F + H++
Sbjct: 186 LANPLYCPDYRIGKVTSEELHYFVQ-NHFT 214
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 98.7 bits (235), Expect = 2e-20
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = +2
Query: 296 KLALXYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEA 475
K YE + LG +H+LR + LTTK SSF I R + +G +S + RE + YT+E
Sbjct: 66 KAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEC 125
Query: 476 TQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYD--IISLPPQIRAVDLLHKAAYRRG 649
+ ++ +E L N+ + EFR WE+ D P+LK D + PQ ++ LH AAY+
Sbjct: 126 LRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYQNA 185
Query: 650 LGNSLFISPKRINDISSESLQPFCKPEHYS 739
L N L+ RI ++SE L F + H++
Sbjct: 186 LANPLYCPDYRIGKVTSEELHYFVQ-NHFT 214
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 48.0 bits (109), Expect = 4e-05
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Frame = +2
Query: 311 YEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKL 490
YE + G +H L A TK S ++ ++ +GA+++A RE Y +A L
Sbjct: 91 YENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDL 150
Query: 491 NDALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYRR-GLGNS 661
A+EIL +++ N E+ + ++ + ++ V D LH AY+ LG +
Sbjct: 151 PRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRT 210
Query: 662 LFISPKRINDISSESLQPFCKPEHY 736
+ + I IS + L + HY
Sbjct: 211 ILGPTENIKSISRKDLVDYI-TTHY 234
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 45.2 bits (102), Expect = 3e-04
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Frame = +2
Query: 311 YEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKL 490
YE + G +H A TK S ++ ++ +GA+++A RE Y +A L
Sbjct: 82 YENEKNNGTAHFPEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDL 141
Query: 491 NDALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYRR-GLGNS 661
A+EIL +++ N E+ + ++ + ++ V D LH AY+ LG +
Sbjct: 142 PRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRT 201
Query: 662 LFISPKRINDISSESLQPFCKPEHY 736
+ + I IS + L + HY
Sbjct: 202 ILGPTENIKSISRKDLVDYI-TTHY 225
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 39.5 bits (88), Expect = 0.015
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +2
Query: 311 YEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKL 490
+E + G + L A TKN +++++ +GA+++A RE Y ++A L
Sbjct: 81 FETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDL 140
Query: 491 NDALEILNNLVSN 529
A+E+L ++V N
Sbjct: 141 PKAVELLGDIVQN 153
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 39.5 bits (88), Expect = 0.015
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +2
Query: 311 YEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKL 490
+E + G + L A TKN +++++ +GA+++A RE Y ++A L
Sbjct: 81 FETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDL 140
Query: 491 NDALEILNNLVSN 529
A+E+L ++V N
Sbjct: 141 PKAVELLGDIVQN 153
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 39.5 bits (88), Expect = 0.015
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +2
Query: 311 YEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKL 490
+E + G + L A TKN +++++ +GA+++A RE Y ++A L
Sbjct: 81 FETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDL 140
Query: 491 NDALEILNNLVSN 529
A+E+L ++V N
Sbjct: 141 PKAVELLGDIVQN 153
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,043,637
Number of Sequences: 237096
Number of extensions: 2354315
Number of successful extensions: 4013
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4013
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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