Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_A13
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 4.2
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 31 4.2
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 31 4.2
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 31 4.2
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 31 4.2
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 31 4.2
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 4.2
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 31 4.2
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 4.2
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 31 4.2
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 4.2
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 31 4.2
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 31 4.2
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 31 4.2
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 30 5.6
AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing regula... 30 5.6
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 29 9.8
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 29 9.8
X07882-1|CAA30729.1| 226|Homo sapiens Po protein protein. 29 9.8
X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein. 29 9.8
S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein. 29 9.8
K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich pro... 29 9.8
BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein. 29 9.8
BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein. 29 9.8
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 29 9.8
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 29 9.8
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 30.7 bits (66), Expect = 4.2
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = -1
Query: 380 PXXGGGXKXPPXKXGXKGGPLXXGXXXX*KPQGGGXV*PPXGGPXTTEPXDXEIEGXLKR 201
P G G K P G KGG + G KP GG + P G P E G +
Sbjct: 192 PGPGPGPKQGPGPGGPKGGKMPGGP----KPGGGPGLSTPGGHPKPPHRGGGEPRGGRQH 247
Query: 200 RP 195
P
Sbjct: 248 HP 249
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 30.7 bits (66), Expect = 4.2
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 478 PPXPP--PXXKGXXXPPXXXXXFFGPXKGGFLXTPXFXGXXXKXPPGKXGXRGALXPXGX 305
PP P P G PP F GP KG P F PPG G +GAL P G
Sbjct: 723 PPGAPGTPGRIGLEGPPGPPG-FPGP-KG----EPGFALPGPPGPPGLPGFKGALGPKGD 776
Query: 304 XPFKNP 287
F P
Sbjct: 777 RGFPGP 782
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 30.7 bits (66), Expect = 4.2
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 478 PPXPP--PXXKGXXXPPXXXXXFFGPXKGGFLXTPXFXGXXXKXPPGKXGXRGALXPXGX 305
PP P P G PP F GP KG P F PPG G +GAL P G
Sbjct: 723 PPGAPGTPGRIGLEGPPGPPG-FPGP-KG----EPGFALPGPPGPPGLPGFKGALGPKGD 776
Query: 304 XPFKNP 287
F P
Sbjct: 777 RGFPGP 782
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 30.7 bits (66), Expect = 4.2
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 478 PPXPP--PXXKGXXXPPXXXXXFFGPXKGGFLXTPXFXGXXXKXPPGKXGXRGALXPXGX 305
PP P P G PP F GP KG P F PPG G +GAL P G
Sbjct: 723 PPGAPGTPGRIGLEGPPGPPG-FPGP-KG----EPGFALPGPPGPPGLPGFKGALGPKGD 776
Query: 304 XPFKNP 287
F P
Sbjct: 777 RGFPGP 782
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 30.7 bits (66), Expect = 4.2
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 478 PPXPP--PXXKGXXXPPXXXXXFFGPXKGGFLXTPXFXGXXXKXPPGKXGXRGALXPXGX 305
PP P P G PP F GP KG P F PPG G +GAL P G
Sbjct: 642 PPGAPGTPGRIGLEGPPGPPG-FPGP-KG----EPGFALPGPPGPPGLPGFKGALGPKGD 695
Query: 304 XPFKNP 287
F P
Sbjct: 696 RGFPGP 701
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPP 464
PP GG G PP G GGGP G P PP
Sbjct: 15 PPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPP 62
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.7 bits (66), Expect = 4.2
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = -1
Query: 380 PXXGGGXKXPPXKXGXKGGPLXXGXXXX*KPQGGGXV*PPXGGPXTTEPXDXEIEGXLKR 201
P G G K P G KGG + G KP GG + P G P E G +
Sbjct: 192 PGPGPGPKQGPGPGGPKGGKMPGGP----KPGGGPGLSTPGGHPKPPRRGGGEPRGGRQH 247
Query: 200 RP 195
P
Sbjct: 248 HP 249
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 30.7 bits (66), Expect = 4.2
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 478 PPXPP--PXXKGXXXPPXXXXXFFGPXKGGFLXTPXFXGXXXKXPPGKXGXRGALXPXGX 305
PP P P G PP F GP KG P F PPG G +GAL P G
Sbjct: 331 PPGAPGTPGRIGLEGPPGPPG-FPGP-KG----EPGFALPGPPGPPGLPGFKGALGPKGD 384
Query: 304 XPFKNP 287
F P
Sbjct: 385 RGFPGP 390
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 30.7 bits (66), Expect = 4.2
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = -1
Query: 380 PXXGGGXKXPPXKXGXKGGPLXXGXXXX*KPQGGGXV*PPXGGPXTTEPXDXEIEGXLKR 201
P G G K P G KGG + G KP GG + P G P E G +
Sbjct: 192 PGPGPGPKQGPGPGGPKGGKMPGGP----KPGGGPGLSTPGGHPKPPHRGGGEPRGGRQH 247
Query: 200 RP 195
P
Sbjct: 248 HP 249
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 30.7 bits (66), Expect = 4.2
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = -1
Query: 380 PXXGGGXKXPPXKXGXKGGPLXXGXXXX*KPQGGGXV*PPXGGPXTTEPXDXEIEGXLKR 201
P G G K P G KGG + G KP GG + P G P E G +
Sbjct: 119 PGPGPGPKQGPGPGGPKGGKMPGGP----KPGGGPGLSTPGGHPKPPHRGGGEPRGGRQH 174
Query: 200 RP 195
P
Sbjct: 175 HP 176
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.7 bits (66), Expect = 4.2
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = -1
Query: 380 PXXGGGXKXPPXKXGXKGGPLXXGXXXX*KPQGGGXV*PPXGGPXTTEPXDXEIEGXLKR 201
P G G K P G KGG + G KP GG + P G P E G +
Sbjct: 192 PGPGPGPKQGPGPGGPKGGKMPGGP----KPGGGPGLSTPGGHPKPPHRGGGEPRGGRQH 247
Query: 200 RP 195
P
Sbjct: 248 HP 249
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.7 bits (66), Expect = 4.2
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 478 PPXPP--PXXKGXXXPPXXXXXFFGPXKGGFLXTPXFXGXXXKXPPGKXGXRGALXPXGX 305
PP P P G PP F GP KG P F PPG G +GAL P G
Sbjct: 723 PPGAPGTPGRIGLEGPPGPPG-FPGP-KG----EPGFALPGPPGPPGLPGFKGALGPKGD 776
Query: 304 XPFKNP 287
F P
Sbjct: 777 RGFPGP 782
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.7 bits (66), Expect = 4.2
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 478 PPXPP--PXXKGXXXPPXXXXXFFGPXKGGFLXTPXFXGXXXKXPPGKXGXRGALXPXGX 305
PP P P G PP F GP KG P F PPG G +GAL P G
Sbjct: 723 PPGAPGTPGRIGLEGPPGPPG-FPGP-KG----EPGFALPGPPGPPGLPGFKGALGPKGD 776
Query: 304 XPFKNP 287
F P
Sbjct: 777 RGFPGP 782
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.7 bits (66), Expect = 4.2
Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 478 PPXPP--PXXKGXXXPPXXXXXFFGPXKGGFLXTPXFXGXXXKXPPGKXGXRGALXPXGX 305
PP P P G PP F GP KG P F PPG G +GAL P G
Sbjct: 723 PPGAPGTPGRIGLEGPPGPPG-FPGP-KG----EPGFALPGPPGPPGLPGFKGALGPKGD 776
Query: 304 XPFKNP 287
F P
Sbjct: 777 RGFPGP 782
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPP 464
PP GG G PP G GGGP G P PP
Sbjct: 15 PPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPCGGGPGGGSAGGPSQPP 62
>AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing
regulatory protein protein.
Length = 115
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPP 464
PP GG G PP G GGGP G P PP
Sbjct: 15 PPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPCGGGPGGGSAGGPSQPP 62
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 29.5 bits (63), Expect = 9.8
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXG---GXXPXGGGPQKGXXXXFXXKXPPXPPPXXKGXXXP 437
PP G G PP G G P G P PP PPP +G P
Sbjct: 260 PPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPP 319
Query: 436 P 434
P
Sbjct: 320 P 320
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 29.5 bits (63), Expect = 9.8
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXG---GXXPXGGGPQKGXXXXFXXKXPPXPPPXXKGXXXP 437
PP G G PP G G P G P PP PPP +G P
Sbjct: 260 PPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPP 319
Query: 436 P 434
P
Sbjct: 320 P 320
>X07882-1|CAA30729.1| 226|Homo sapiens Po protein protein.
Length = 226
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPPP 461
PP + G G PP G P GG PQ+ P PPP
Sbjct: 165 PPQQEGNKPQGP---PPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPP 210
>X07704-1|CAA30542.1| 234|Homo sapiens Po protein protein.
Length = 234
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPPP 461
PP + G G PP G P GG PQ+ P PPP
Sbjct: 173 PPQQEGNKPQGP---PPPGKPQGPPPPGGNPQQPQAPPAGKPQGPPPPP 218
>S80916-1|AAB50687.2| 238|Homo sapiens parotid 'o' protein protein.
Length = 238
Score = 29.5 bits (63), Expect = 9.8
Identities = 26/112 (23%), Positives = 32/112 (28%), Gaps = 2/112 (1%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPPPXXKGXXXPPXX 428
PP + G G PP G P GG +G P P + PP
Sbjct: 30 PPPQGGNQSQGPP--PPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPP 87
Query: 427 XXXFFGPXKGG--FLXTPXFXGXXXKXPPGKXGXRGALXPXGXXPFKNPRXG 278
P +GG P G + PP P P + P G
Sbjct: 88 GKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSHRPPPPPGKPERPPPQG 139
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPPP 461
PP + G G PP G P GG PQ+ P PPP
Sbjct: 177 PPQQEGNKPQGP---PPPGKPQGPPPPGGNPQQPQAPPAGKPQGPPPPP 222
>K03207-1|AAA60188.1| 247|Homo sapiens salivary proline-rich
protein precursor protein.
Length = 247
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPPP 461
PP + G G PP G P GG PQ+ P PPP
Sbjct: 186 PPQQEGNKPQGP---PPPGKPQGPPPAGGNPQQPQDPPAGKPQGPPPPP 231
>BC130386-1|AAI30387.1| 268|Homo sapiens PRB4 protein protein.
Length = 268
Score = 29.5 bits (63), Expect = 9.8
Identities = 26/112 (23%), Positives = 32/112 (28%), Gaps = 2/112 (1%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPPPXXKGXXXPPXX 428
PP + G G PP G P GG +G P P + PP
Sbjct: 60 PPPQGGNQSQGPP--PPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPP 117
Query: 427 XXXFFGPXKGG--FLXTPXFXGXXXKXPPGKXGXRGALXPXGXXPFKNPRXG 278
P +GG P G + PP P P + P G
Sbjct: 118 GKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSHRPPPPPGKPERPPPQG 169
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPPP 461
PP + G G PP G P GG PQ+ P PPP
Sbjct: 207 PPQQEGNKPQGP---PPPGKPQGPPPPGGNPQQPQAPPAGKPQGPPPPP 252
>BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein.
Length = 183
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXGGXXPXGGGPQKGXXXXFXXKXPPXPPP 461
PP + G G PP G P GG PQ+ P PPP
Sbjct: 117 PPQQEGNKPQGP---PPPGKPQGPPPPGGNPQQPQAPPAGKPQGPPPPP 162
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 29.5 bits (63), Expect = 9.8
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXG---GXXPXGGGPQKGXXXXFXXKXPPXPPPXXKGXXXP 437
PP G G PP G G P G P PP PPP +G P
Sbjct: 297 PPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPP 356
Query: 436 P 434
P
Sbjct: 357 P 357
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 29.5 bits (63), Expect = 9.8
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = -2
Query: 607 PPXKXGGXXXGKXFXPPXXXXG---GXXPXGGGPQKGXXXXFXXKXPPXPPPXXKGXXXP 437
PP G G PP G G P G P PP PPP +G P
Sbjct: 260 PPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPP 319
Query: 436 P 434
P
Sbjct: 320 P 320
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,396,853
Number of Sequences: 237096
Number of extensions: 1804844
Number of successful extensions: 4049
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3647
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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