Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_A09
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.67 
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    25   0.88 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   1.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.2  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 488 NLYYSDPDAEFLDYVN 535
           NLYY+ P +E L YVN
Sbjct: 263 NLYYNSPSSENLYYVN 278


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3

Query: 544 NRSIHIIQELSIRVTIVQIGSFTSIHH*SPTNSNKTVKVSFLCKMNCI 401
           N  I I+  LS+ +TIV   +FT  H    TN  ++  +  L   N I
Sbjct: 3   NSQILILFILSLTITIVMCQTFTYSH--GWTNGKRSTSLEELANRNAI 48


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +2

Query: 479 KAANLYYSDPDAEFLDYVNA---PVGKGKAVNIQ 571
           K  NLYYS   +  L+YVN      GK +A +IQ
Sbjct: 258 KTQNLYYSAMSSHNLNYVNTKQFTQGKFQANDIQ 291


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 141 IFPL*PCAGHWQD 103
           + P  P +GHWQD
Sbjct: 231 VLPNFPSSGHWQD 243


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 24  PLGSKDVKYNDIKKTNF 74
           P  +K++KY+DIK+  +
Sbjct: 339 PKNNKELKYDDIKEMEY 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,755
Number of Sequences: 438
Number of extensions: 4435
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)