Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_P23
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 63 3e-10
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 56 3e-08
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 56 5e-08
AF016420-2|AAB65306.1| 291|Caenorhabditis elegans Serpentine re... 32 0.68
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 32 0.68
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z93379-6|CAB07591.2| 1108|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical... 29 6.4
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = -2
Query: 452 VAGWGRYLQFDNGTVRSSKIKLHVTLPFVQRDVCEANQKPLRNGQRITLWKGQMCAGGEA 273
V GWG ++ G+ S+ + +P + C + P G RI L +CAG
Sbjct: 179 VTGWGSTIE---GSSLSAPTLREIHVPLLSTLFCSS--LPNYIG-RIHL-PSMLCAGYSY 231
Query: 272 GK-DSCKGDSGGPLMYEHSKKYEAVGIVSFGPEKCGQIDIPGVYTNVYEYLPWI 114
GK DSC+GDSGGPLM +E G+VS+G C + +PGVY NV+ WI
Sbjct: 232 GKIDSCQGDSGGPLMCARDGHWELTGVVSWG-IGCARPGMPGVYGNVHSASTWI 284
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 56.4 bits (130), Expect = 3e-08
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Frame = -2
Query: 509 LMLPSTGYTVNPPSKFALTVAGWGRYLQFDNGTVRSSKIKLHVTLPFVQRDVCEANQKPL 330
+ LPS + P + V+GWG G + +++ + +P + R C N +
Sbjct: 137 ICLPSKDFVYTPGRQ--CVVSGWGSM-----GLRYAERLQAAL-IPIINRFDC-VNSSQI 187
Query: 329 RNGQRITLWKGQMCAGG-EAGKDSCKGDSGGPLMYEHSK-KYEAVGIVSFGPEKCGQIDI 156
+ ++ + CAG E G DSC+GDSGGP + G++S+G + C Q
Sbjct: 188 YS----SMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWG-DGCAQKKQ 242
Query: 155 PGVYTNVYEYLPWIQNTI 102
PG+YT V YL WI I
Sbjct: 243 PGIYTMVAPYLSWISAII 260
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 55.6 bits (128), Expect = 5e-08
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Frame = -2
Query: 296 QMCAGGEAGKDSCKGDSGGPLMYEHSK-KYEAVGIVSFGPEKC-GQID---IPGVYTNVY 132
Q+CAG + GDSGGPL+ S +Y +GI S+G + G ID PGVYT +
Sbjct: 214 QICAGAYL-HGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRIS 272
Query: 131 EYLPWIQNTI 102
+Y+PWIQ I
Sbjct: 273 KYVPWIQGVI 282
>AF016420-2|AAB65306.1| 291|Caenorhabditis elegans Serpentine
receptor, class sx protein12 protein.
Length = 291
Score = 31.9 bits (69), Expect = 0.68
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 129 FINICVNSRYIDLATLFGSEAHNTDCFVFFGMFIHKRTTRVTLTRIFTCFTAGTHLSLPQ 308
F N+C+ + A F +E +CF+F +I + + L + + P
Sbjct: 53 FQNLCLVGTILVSALTFITEIRRDECFIFISFYIFSQAAQ-GLLMLLIMIDVLIFVKFPL 111
Query: 309 CY-SLAIAQWFLVCFADVSLY 368
Y +LA ++F CF V LY
Sbjct: 112 FYRNLANWKYFSSCFIFVFLY 132
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 290 CAGGEAGKDSCKGDSGGPLMYEHSKKYE--AVGIVSFGPEKCGQI 162
C E K+ C GDSGG L + S + IVS+G + C Q+
Sbjct: 260 CTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYGSD-CVQL 303
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -2
Query: 263 SCKGDSGGPLMYEHSKKYEA--VGIVSFGPEKCGQIDIPGVYTNVYEYLPWIQN 108
+C GDSGG L Y A + I SFG C ++ +T V YL I N
Sbjct: 234 TCHGDSGGGLEYRDDNYGRAFLIAITSFGTRGCPS-NMLARFTRVDMYLNLICN 286
>Z93379-6|CAB07591.2| 1108|Caenorhabditis elegans Hypothetical
protein F21H7.9 protein.
Length = 1108
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 270 TCFTAGTHL-SLPQCYSLAIAQWFLVCFADVSLYKR-QCYVKLDLAASNCPIVELQVSSP 443
TC AG + SL Y++ + QW L AD+ + R Q V L L + + ++
Sbjct: 99 TCNRAGVAVASLADFYNVPVFQWGLTTTADIGNFSRYQTTVTLSLDTHSISLAVREIL-- 156
Query: 444 ASHGQSEFTW 473
+G SEF +
Sbjct: 157 RQYGWSEFVF 166
>AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical
protein F25E5.10 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 260 CKGDSGGPLMYEHSKKYEAVGIVSFGPEKCGQIDIPGVYT 141
C GD GG + + A G+ GP +C + + VYT
Sbjct: 247 CNGDFGGAAVSKFHGSVRAYGVYVDGPYECNKANRRTVYT 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,533,688
Number of Sequences: 27780
Number of extensions: 321322
Number of successful extensions: 953
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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