Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_P22
(822 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 38 1e-04
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 31 0.015
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 31 0.015
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 30 0.026
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 27 0.18
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 27 0.18
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 27 0.24
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 24 1.3
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 24 1.7
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 2.9
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 23 2.9
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 23 3.9
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 6.8
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 21 8.9
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 37.5 bits (83), Expect = 1e-04
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Frame = -1
Query: 570 RCE-CGRVFKSKISLAEH--IHS-------DHTS-KITDNTELKL-APVSTNEYNYTCEV 427
RCE C R F +L H +H+ +H S K +D+ +LK + TNE + C+
Sbjct: 192 RCEHCDRQFVQVANLRRHLRVHTGERPYGCEHCSMKFSDSNQLKAHVLIHTNEKPFECDK 251
Query: 426 CEQKFKRRGILVNH 385
C +F+RR LV+H
Sbjct: 252 CRGRFRRRHHLVHH 265
Score = 30.3 bits (65), Expect = 0.019
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 13/84 (15%)
Frame = -2
Query: 335 RVRHFPCVVCPKVYGTAAKRNQHVRVHHPGAEKIPAQS----------IEGGVRVY---E 195
R R F C VC + +G H R H G + Q ++ +R++
Sbjct: 131 RDRPFTCEVCNRSFGYKHVLQNHERTH-TGEKPFECQECHKRFTRDHHLKTHMRLHTGER 189
Query: 194 PAQCSFCPRQYATRAKMLQHARLH 123
P +C C RQ+ A + +H R+H
Sbjct: 190 PYRCEHCDRQFVQVANLRRHLRVH 213
Score = 28.3 bits (60), Expect = 0.078
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 459 STNEYNYTCEVCEQKFKRRGILVNH 385
S+ + +TCEVC + F + +L NH
Sbjct: 129 SSRDRPFTCEVCNRSFGYKHVLQNH 153
Score = 25.8 bits (54), Expect = 0.42
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 456 TNEYNYTCEVCEQKFKRRGILVNHLWRVH 370
T E Y CE C+++F + L HL RVH
Sbjct: 186 TGERPYRCEHCDRQFVQVANLRRHL-RVH 213
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 30.7 bits (66), Expect = 0.015
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Frame = -2
Query: 323 FPCVVCPKVYGTAAKRNQHVRVHH-------PGAEKIPAQ--SIEGGVRVY---EPAQCS 180
+ C+ C K + AA HVR H P ++ +Q S+ +R + P +C
Sbjct: 22 YRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCR 81
Query: 179 FCPRQYATRAKMLQHARLH 123
C + ++ + + +H R+H
Sbjct: 82 LCKKAFSDSSTLTKHLRIH 100
Score = 27.5 bits (58), Expect = 0.14
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = -1
Query: 570 RC-ECGRVFKSKISLAEHIHSDHTSK-----ITDNTELKLAPVSTN------EYNYTCEV 427
RC +C + F +L H+ + K + D + + V+T+ E Y C +
Sbjct: 23 RCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRL 82
Query: 426 CEQKFKRRGILVNHLWRVHN 367
C++ F L HL R+H+
Sbjct: 83 CKKAFSDSSTLTKHL-RIHS 101
Score = 26.2 bits (55), Expect = 0.31
Identities = 15/69 (21%), Positives = 30/69 (43%)
Frame = -2
Query: 329 RHFPCVVCPKVYGTAAKRNQHVRVHHPGAEKIPAQSIEGGVRVYEPAQCSFCPRQYATRA 150
R + C +C K + ++ +H+R+H EK P +C C +++
Sbjct: 76 RPYRCRLCKKAFSDSSTLTKHLRIH--SGEK--------------PYECKLCLLRFSQSG 119
Query: 149 KMLQHARLH 123
+ +H R+H
Sbjct: 120 NLNRHMRVH 128
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 30.7 bits (66), Expect = 0.015
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Frame = -2
Query: 323 FPCVVCPKVYGTAAKRNQHVRVHH-------PGAEKIPAQ--SIEGGVRVY---EPAQCS 180
+ C+ C K + AA HVR H P ++ +Q S+ +R + P +C
Sbjct: 278 YRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCR 337
Query: 179 FCPRQYATRAKMLQHARLH 123
C + ++ + + +H R+H
Sbjct: 338 LCKKAFSDSSTLTKHLRIH 356
Score = 27.5 bits (58), Expect = 0.14
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = -1
Query: 570 RC-ECGRVFKSKISLAEHIHSDHTSK-----ITDNTELKLAPVSTN------EYNYTCEV 427
RC +C + F +L H+ + K + D + + V+T+ E Y C +
Sbjct: 279 RCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRL 338
Query: 426 CEQKFKRRGILVNHLWRVHN 367
C++ F L HL R+H+
Sbjct: 339 CKKAFSDSSTLTKHL-RIHS 357
Score = 26.2 bits (55), Expect = 0.31
Identities = 15/69 (21%), Positives = 30/69 (43%)
Frame = -2
Query: 329 RHFPCVVCPKVYGTAAKRNQHVRVHHPGAEKIPAQSIEGGVRVYEPAQCSFCPRQYATRA 150
R + C +C K + ++ +H+R+H EK P +C C +++
Sbjct: 332 RPYRCRLCKKAFSDSSTLTKHLRIH--SGEK--------------PYECKLCLLRFSQSG 375
Query: 149 KMLQHARLH 123
+ +H R+H
Sbjct: 376 NLNRHMRVH 384
Score = 25.8 bits (54), Expect = 0.42
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 12/77 (15%)
Frame = -2
Query: 317 CVVCPKVYGTAAKRNQHVRVHHP---------GAEKIPAQSIEGGVRVY---EPAQCSFC 174
C +C K Y + H+R H A ++ VR + +P +C C
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVC 311
Query: 173 PRQYATRAKMLQHARLH 123
R+++ + + H R H
Sbjct: 312 DRRFSQSSSVTTHMRTH 328
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 29.9 bits (64), Expect = 0.026
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = -2
Query: 329 RHFPCVVCPKVYGTAAKRNQHVRVHHPGAEKIPAQSIEGGVRVYEPAQCSFCPRQYATRA 150
R F C +C + + T H+ VH K P + + QC C +++
Sbjct: 161 RPFKCKICGRAFTTKGNLKTHMGVHRA---KPPMRVLH---------QCPVCHKKFTNAL 208
Query: 149 KMLQHARLH 123
+ QH RLH
Sbjct: 209 VLQQHIRLH 217
Score = 25.8 bits (54), Expect = 0.42
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 335 RVRHFPCVVCPKVYGTAAKRNQHVRVH 255
RV H C VC K + A QH+R+H
Sbjct: 192 RVLH-QCPVCHKKFTNALVLQQHIRLH 217
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -2
Query: 206 RVYEPAQCSFCPRQYATRAKMLQHARLH 123
++ +P QC C R + ++ + H R H
Sbjct: 130 KLSDPNQCVICHRVLSCKSALQMHYRTH 157
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 441 YTCEVCEQKFKRRGILVNHLWRVH 370
+ C VC +KF +L H+ R+H
Sbjct: 195 HQCPVCHKKFTNALVLQQHI-RLH 217
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 27.1 bits (57), Expect = 0.18
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 194 PAQCSFCPRQYATRAKMLQHARLH 123
P +C C RQ+ A + +H R+H
Sbjct: 37 PYRCEHCDRQFVQVANLRRHLRVH 60
Score = 25.8 bits (54), Expect = 0.42
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 456 TNEYNYTCEVCEQKFKRRGILVNHLWRVH 370
T E Y CE C+++F + L HL RVH
Sbjct: 33 TGERPYRCEHCDRQFVQVANLRRHL-RVH 60
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 27.1 bits (57), Expect = 0.18
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 456 TNEYNYTCEVCEQKFKRRGILVNHLWRVHN 367
T E + C +C ++F R L H+ + HN
Sbjct: 370 TGEKRFACPICNKRFMRSDHLAKHV-KTHN 398
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -2
Query: 329 RHFPCVVCPKVYGTAAKRNQHVRVHHPGAEK 237
+ F C +C K + + +HV+ H+ +K
Sbjct: 373 KRFACPICNKRFMRSDHLAKHVKTHNGNGKK 403
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 308 CPKVYGTAAKRNQHVRVH 255
C KVYG + H+R H
Sbjct: 322 CGKVYGKTSHLKAHLRWH 339
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 26.6 bits (56), Expect = 0.24
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 456 TNEYNYTCEVCEQKFKRRGILVNH 385
T+E Y+C++C + F+R+ L +H
Sbjct: 103 TDERPYSCDICGKAFRRQDHLRDH 126
Score = 24.6 bits (51), Expect = 0.96
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = -2
Query: 248 GAEKIPAQS--IEGGVRVYEPAQCSFCPRQYATRAKMLQHARLH 123
G + P Q + G ++ C +C RQ+ +L H R H
Sbjct: 59 GPPRTPLQPKLVAGKLKPKRQFICKYCNRQFTKSYNLLIHERTH 102
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 438 TCEVCEQKFKRRGILVNHL 382
TC+VC+Q F L NH+
Sbjct: 549 TCKVCDQAFSSLKELSNHM 567
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 97 TRRFIRCGWCSLACCSILARVAYWRGQNEHW 189
TR+ ++C WC + S LA + Q +H+
Sbjct: 475 TRQILKCMWCGQSFRS-LAEMTSHMQQTQHY 504
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 321 PVRGVPQSVRNRREEEPT 268
P+ P+S ++RE+ PT
Sbjct: 836 PLNSTPRSTPDKREKSPT 853
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 23.8 bits (49), Expect = 1.7
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = -2
Query: 317 CVVCPKVYGTAAKRNQHVRVH 255
C +CPK + H+R H
Sbjct: 10 CTICPKAFSRPWLLQGHIRTH 30
Score = 23.4 bits (48), Expect = 2.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 194 PAQCSFCPRQYATRAKMLQHARLH 123
P +C+ CP+ ++ + H R H
Sbjct: 7 PCKCTICPKAFSRPWLLQGHIRTH 30
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 778 YNPYSLDDRVDNLLTSQLDFPXTMQQN 698
Y P S DD+ + TSQ P QN
Sbjct: 1238 YKPVSTDDKTEVKPTSQKIVPNLRNQN 1264
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -1
Query: 585 RRSSLRCECGRVFKSKISLAEHIHSDHTS 499
R + C C +K K + H DHT+
Sbjct: 124 RIADFECNCKNGWKGKTCSLKDSHCDHTT 152
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 22.6 bits (46), Expect = 3.9
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 208 TPPSIDCAGIFSAPG*CTRTCWFLFAAVPYTLGHTTHGKWRTRFSK 345
TP S++ G FS G W L +TLG T G +RT F K
Sbjct: 19 TPVSVEPTG-FSPKG--YSLLWILL----FTLGVTISGVYRTDFYK 57
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -2
Query: 359 IXKVPLEKRVRHFPCVVCPKVYGTAAKRNQHVRVH 255
+ KV +++ F C C V T ++ H +VH
Sbjct: 190 VPKVNSHGKIKTFKCKQCDFVAITKLEQWNHSKVH 224
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 287 AAKRNQHVRVHHPGA 243
A N+ +RVHH G+
Sbjct: 140 ATTSNEFIRVHHSGS 154
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,062
Number of Sequences: 336
Number of extensions: 4049
Number of successful extensions: 59
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -