Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_P21
         (802 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018681-1|AAH18681.1|  112|Homo sapiens NDST2 protein protein.        38   0.042

>BC018681-1|AAH18681.1|  112|Homo sapiens NDST2 protein protein.
          Length = 112

 Score = 37.9 bits (84), Expect = 0.042
 Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
 Frame = +1

Query: 208 ERWV----AGRSAPAGGAAVTRPKLTRAAC--CPQS*TSRGKDPTPPSCPALALRCS 360
           ERW+    A RS   GGAA TRP   +A     P +  S G   TPPS P + L+CS
Sbjct: 55  ERWLGQAAAERSLGDGGAAATRPVAPKAGKPGSPGTRRSPGTAGTPPSPPGMKLKCS 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,915,708
Number of Sequences: 237096
Number of extensions: 1227406
Number of successful extensions: 3290
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3289
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)