Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_P18
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 363 e-101
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 361 e-101
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 154 2e-38
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 87 4e-18
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 34 0.031
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.22
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 30 0.50
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.88
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.0
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 6.2
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 6.2
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 8.2
SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr 1|||Ma... 26 8.2
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 363 bits (892), Expect = e-101
Identities = 161/204 (78%), Positives = 182/204 (89%)
Frame = -2
Query: 742 SSITASXRFDGAXNLDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIRNAC 563
SSITAS RF G+ N+DL EFQTNLVPYPRIHFPLVTY+P++SA KA+HE SV EI N C
Sbjct: 240 SSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQC 299
Query: 562 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 383
FEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI
Sbjct: 300 FEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGI 359
Query: 382 NYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 203
Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEE
Sbjct: 360 CYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEE 419
Query: 202 GEFSEAREDLAALEKDYEEVGMDS 131
GEFSEAREDLAALE+DYEEVG DS
Sbjct: 420 GEFSEAREDLAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 361 bits (888), Expect = e-101
Identities = 161/204 (78%), Positives = 181/204 (88%)
Frame = -2
Query: 742 SSITASXRFDGAXNLDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIRNAC 563
SSITAS RF+G+ N+DL EFQTNLVPYPRIHFPLVTYAP++SA KA+HE SV EI N C
Sbjct: 236 SSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQC 295
Query: 562 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 383
FEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI
Sbjct: 296 FEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGI 355
Query: 382 NYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 203
+PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEE
Sbjct: 356 CDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEE 415
Query: 202 GEFSEAREDLAALEKDYEEVGMDS 131
GEFSEAREDLAALE+DYEEVG DS
Sbjct: 416 GEFSEAREDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 154 bits (373), Expect = 2e-38
Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 3/206 (1%)
Frame = -2
Query: 742 SSITASXRFDGAXNLDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIRNAC 563
+ +T S RF G N DL + N+VP+PR+HF +V +AP+ + + + +SV E+
Sbjct: 234 AGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQM 293
Query: 562 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 383
F+ N MV DPRHG+Y+ L+RG V K+V+ I +++TK + FV+W P +
Sbjct: 294 FDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAV 353
Query: 382 NYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 203
PP DL + + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E
Sbjct: 354 CSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDE 405
Query: 202 GEFSEAR---EDLAALEKDYEEVGMD 134
EF+EA DL + + Y+E G+D
Sbjct: 406 MEFTEAESNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 86.6 bits (205), Expect = 4e-18
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 7/205 (3%)
Frame = -2
Query: 742 SSITASXRFDGAXNLDLTEFQTNLVPYPRIHFPLVTYAPVIS---AEKAYHEQLSVAEIR 572
S+ T + R+ G N DL +L+P PR HF L +Y P + E + +V ++
Sbjct: 237 SASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVM 296
Query: 571 NACFEPANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 395
P NQMV +P + +++ + +G+ P DV+ ++ I+ +R F+ W P
Sbjct: 297 RRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASI 356
Query: 394 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 215
+V ++ + P + ++ + ML+N T+IA + R ++D + + AF+ Y E
Sbjct: 357 QVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKE 411
Query: 214 GMEE---GEFSEAREDLAALEKDYE 149
+ E EF +R+ +A L +YE
Sbjct: 412 AIFEDDLNEFDSSRDVVADLINEYE 436
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 33.9 bits (74), Expect = 0.031
Identities = 39/140 (27%), Positives = 56/140 (40%), Gaps = 3/140 (2%)
Frame = -3
Query: 777 PPTXPDXXSTVXPRSLLLXDSTAL*IWTSPS-SRLTWCLTPVSTSHWSRTRQSSLPRRPT 601
PPT ST P + T+ +SP S T C T S T S+ P PT
Sbjct: 360 PPTSTSSTSTPPPPASTSSTGTS----SSPLLSTSTSCTTSTSIPP---TGNSTTPVTPT 412
Query: 600 M--NSFPSPRSETHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVL 427
+ S +P + T+ ++ + +TPV ++ CT TS P T + S P
Sbjct: 413 VPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTT 470
Query: 426 SNSSTGVQPVSRSVSTTSHP 367
+N +T S TS P
Sbjct: 471 TNCTTSTSIPYTSTPVTSTP 490
Score = 30.3 bits (65), Expect = 0.38
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = -3
Query: 687 SSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSETHASSPPTRW*NATPVMASTW 508
S+ + + TPV++S++ T SS P T P + T+ ++ + +TPV ++
Sbjct: 499 STSVPYTSTPVTSSNY--TISSSTPVTST------PVTTTNCTTSTSVLYTSTPVTSTPL 550
Query: 507 LAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 373
CT TS P T P S ++ S++ PV+ + TTS
Sbjct: 551 ATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 28.3 bits (60), Expect = 1.5
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = -3
Query: 693 SPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSETHASSPPTRW*NATPVMAS 514
+P+ T TP++T++ T +S+P T + +P + T+ ++ + +TPV ++
Sbjct: 410 TPTVPPTSSSTPLTTTNC--TTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTST 466
Query: 513 TWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 373
CT TS P T + S P +N +T S TS
Sbjct: 467 PLTTTNCTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
Score = 25.8 bits (54), Expect = 8.2
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Frame = -3
Query: 663 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSETHASSPPTRW*NATPVMASTWLAVCCTVV 484
TP++T++ T +S+P T + +P + T+ ++ + +TPV +S + T V
Sbjct: 466 TPLTTTNC--TTSTSIPYTSTPVT-STPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPV 522
Query: 483 TSYPRM*TRPSLPSKPSVLSNSSTGVQ-PVSRSVSTTS 373
TS P T + + SVL S+ P++ + TTS
Sbjct: 523 TSTPV--TTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.22
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = -3
Query: 621 SLPRRPTMNSFPSPRSETHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 442
S+P+ P P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 441 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 355
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 29.9 bits (64), Expect = 0.50
Identities = 25/97 (25%), Positives = 43/97 (44%)
Frame = +2
Query: 449 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVSDLGDGKLFMVGLLGRDDW 628
S G +LGY ++ A++V+A + V HL+ G D + K G D
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459
Query: 629 RVRDQWEVDTGVRHQVSLELGEVQIXSAVESXRSSDR 739
R Q+E++ G++ + G +I ++ S DR
Sbjct: 460 VDRVQYELEAGLQ-DIKSGKGNPEIVLNMDYAISYDR 495
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.88
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -3
Query: 654 STSHWSRTRQSSLPRRPTMNSFPSPRSETHASSPPTRW*NATPVMASTWLAVCCTVVTSY 475
STS + T SS RP +S S +H SS ++ ++ PV ++ + + +S+
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSH 435
Query: 474 PRM*TRPSLPSKPSVLSNSST 412
+ SL SKP + ++SS+
Sbjct: 436 SSSHSLSSLSSKPILTASSSS 456
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 285 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 112
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 111 EPKSTK 94
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -3
Query: 690 PSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSETHASSPPTR 544
P+++ P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 627 QSSLPRRPTMNSFPSPRSETHASSPPTR 544
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 453 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 367
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 472 WVRRHHGTAYSKPCTCHDGG 531
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr
1|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 646 PLVTYAPVISAEKAYHEQLSVAEIRNAC 563
PL+ + P ++ E HE++ + ++R AC
Sbjct: 26 PLIDFGPYVNQEPGAHERI-IQQLRAAC 52
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,152,516
Number of Sequences: 5004
Number of extensions: 67139
Number of successful extensions: 258
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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