Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_P17
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121...    97   2e-20
07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,127...    93   3e-19
03_05_0106 + 20880069-20881001                                         37   0.018
04_04_0012 + 22145111-22146388                                         36   0.041

>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
            1216413-1216738,1216860-1217013,1217377-1217438,
            1218078-1218133,1219456-1221279,1221775-1222698,
            1222855-1222866
          Length = 1242

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 49/96 (51%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
 Frame = -2

Query: 662  IREESLRTYLFTYAHVYASLSLRSLADMFELPRQRVHSLVSKMIINEELLASLDDPSECA 483
            I+EE+LRTYLF+Y+  Y SLSL  L  MF+L  Q+ HS+VSKM+++EEL AS D P++C 
Sbjct: 1047 IKEEALRTYLFSYSSCYQSLSLDQLTTMFDLSEQQAHSIVSKMMMHEELHASWDQPTKCI 1106

Query: 482  ILHRSEPTRMQALALQLADKVGXF-GGFE*AYIRKT 378
            I H  + TR+Q L  Q+ADK+       E AY  KT
Sbjct: 1107 IFHNVDQTRLQGLLFQMADKLSVLVESNERAYEAKT 1142


>07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,
            1278314-1278367
          Length = 944

 Score = 93.1 bits (221), Expect = 3e-19
 Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
 Frame = -2

Query: 662  IREESLRTYLFTYAHVYASLSLRSLADMFELPRQRVHSLVSKMIINEELLASLDDPSECA 483
            I+EE+LRTYL +Y+  Y SLSL  L  MF+L  Q+ HS+VSKM+++EEL AS D P++C 
Sbjct: 733  IKEEALRTYLLSYSSCYESLSLDQLTTMFDLSEQQAHSIVSKMMMHEELHASWDQPTKCI 792

Query: 482  ILHRSEPTRMQALALQLADKVGXF-GGFE*AYIRKT 378
            I H  + TR+Q L  Q++DK+       E AY  KT
Sbjct: 793  IFHNVDQTRLQGLLFQMSDKLSVLVESNERAYEAKT 828


>03_05_0106 + 20880069-20881001
          Length = 310

 Score = 37.1 bits (82), Expect = 0.018
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = -2

Query: 614 YASLSLRSLADMFELPRQRVHSLVSKMIINEELLASLDDPSECAILHRSEPT 459
           YA + +  +A+M ELP   V   +S+MI++++   +LD  + C I+     T
Sbjct: 229 YARVEIAHIAEMIELPVDHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDPKT 280


>04_04_0012 + 22145111-22146388
          Length = 425

 Score = 35.9 bits (79), Expect = 0.041
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 614 YASLSLRSLADMFELPRQRVHSLVSKMIINEELLASLDDPSECAILHRSEPT 459
           Y+ + +  +A+M ELP   V   +S+MI++++   +LD  + C I+     T
Sbjct: 344 YSRVEIAHIAEMIELPVDHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDPKT 395


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,064,690
Number of Sequences: 37544
Number of extensions: 251202
Number of successful extensions: 646
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)