Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_P13
         (804 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1030 + 8158901-8159050,8159178-8159310,8159410-8159708,816...    28   10.0 

>01_01_1030 +
           8158901-8159050,8159178-8159310,8159410-8159708,
           8160147-8160287
          Length = 240

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
 Frame = -1

Query: 648 HKQIPKHHDYVLNEEYLASQKNRAKLITRIRPDEPVVADNVILESNVV---KIVRPSKRE 478
           HK  P+    V ++++ +S  N  + + R +    + + N  L++ +    +I  P K  
Sbjct: 74  HKVRPEDQKSVHSQKFCSST-NGMRFLNR-KDLMAIGSYNAFLQTKLPPEHRIYDPDKET 131

Query: 477 VERDIGTALVRLRRGYNLENVRVPARYPYLAVPKYYRNRHWG 352
           +E  + T L    RG+ +E + V +  P +     ++ RHWG
Sbjct: 132 LESGMATFLTAFPRGFAIEVLDVYSGPPRIV----FKFRHWG 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,011,448
Number of Sequences: 37544
Number of extensions: 335357
Number of successful extensions: 781
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)