Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_P06
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316...    31   1.2  
03_05_0737 + 27258320-27259007,27259263-27259435,27262684-272627...    31   1.2  
02_05_0363 - 28297295-28298167                                         31   1.5  
08_01_0059 - 394001-394708                                             29   3.6  
06_01_0486 - 3455030-3455770                                           29   6.2  
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    28   8.3  
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944...    28   8.3  

>03_06_0656 -
           35330109-35331011,35331154-35331360,35331455-35331632,
           35331726-35332221,35332889-35333033
          Length = 642

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 533 AEALSLIVKAVTAIGA-DQGGDYQNRSNREGFQNRQYDGYQNRHANRTGG-DGYYGNGDV 360
           A+A +      T  GA D  G    + N  G +N  YD Y   ++N  GG   Y  NG+ 
Sbjct: 31  ADAFAAANPQPTKKGAKDVKGKNNGQENGSGGRNYDYDYYNRGYSNNNGGYQNYNYNGNN 90

Query: 359 SEG 351
           S G
Sbjct: 91  SNG 93



 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
 Frame = -2

Query: 491 GADQGGDYQNR---SNREGFQNRQY-----DGYQNRHANRTGGDGYYGNG 366
           G +   DY NR   +N  G+QN  Y     +GYQN + N   G G+Y  G
Sbjct: 62  GRNYDYDYYNRGYSNNNGGYQNYNYNGNNSNGYQNYNYN-GNGQGHYNGG 110


>03_05_0737 +
           27258320-27259007,27259263-27259435,27262684-27262758,
           27262832-27263296
          Length = 466

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 11/62 (17%)
 Frame = -2

Query: 491 GADQGGDYQN-RSNREG---FQNR----QYDGYQNR-HANRTGG-DGYYGN-GDVSEGAH 345
           G   GG YQN R   EG   + N     Q  GY NR    R+GG + YY N G  S+G  
Sbjct: 394 GGGGGGGYQNGRGGGEGGGYYYNEPGYYQQRGYSNRGRGGRSGGGNSYYNNQGGGSQGGG 453

Query: 344 HA 339
           HA
Sbjct: 454 HA 455


>02_05_0363 - 28297295-28298167
          Length = 290

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 283 PCYPPWKPLPSPYRSRPFSA*CAPSDTSPLP 375
           P  PPW+P PSP R  P    C    TS +P
Sbjct: 201 PTDPPWQPSPSPMRRTP----CRRRQTSTMP 227


>08_01_0059 - 394001-394708
          Length = 235

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
 Frame = +1

Query: 283 PCYPPWKPLPSPYRSRPFSA*CAP-----SDTSPLP*YPSPP 393
           P  PP  P P PY   P S   AP     S  +P+P  PSPP
Sbjct: 31  PIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPPSPP 72


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +1

Query: 274 YRVPCYPPWKPLPSPYRSRPFSA*CAPSDTSPLP*YPSPPVRFAC 408
           Y  P  PP+ P P+P    P+     P    P    PSPP    C
Sbjct: 115 YIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPPPSPPATKTC 159


>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 280 VPCYPPWKPLPSPYRSRPFSA*CAPSDTSPLP*YPSPPVR 399
           +P  PP  P P+  +  PF     P    P P YP PP++
Sbjct: 405 LPPPPPGLP-PAQMQMAPFGVPPGPPPMLPPPFYPGPPIQ 443


>01_05_0687 +
           24288648-24292746,24293737-24293844,24294333-24294442,
           24295208-24295282
          Length = 1463

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 300 PGRITRDAVEELLEEQHAVRLGLPALNTTQGDP 202
           P +   DAVEE+ EE H  R    A+  T G+P
Sbjct: 417 PDKAENDAVEEMQEEAHGSRF---AMEATYGEP 446


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,324,783
Number of Sequences: 37544
Number of extensions: 434473
Number of successful extensions: 1550
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)