Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_P04
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p...    28   7.2  
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane...    28   7.2  
Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
           protein K08E5.3a protein.
          Length = 3767

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 22/79 (27%), Positives = 35/79 (44%)
 Frame = +2

Query: 452 KRIFNTHFLDSESERPDSLSETLNAFLTENCNYHYSNVSLLLDIVLTQSLPVFFFFEFMA 631
           K + +T  +D   +  D   E +N  LT NC  + + V++  + +   SL    F     
Sbjct: 178 KCVSDTFIMDGNWDCEDGSDEFINKTLTANCTRN-NKVNIATNSL---SLGKLKFCSGKN 233

Query: 632 WYLGPLGQLPVFMGGCWGC 688
                LGQ+ V +GG W C
Sbjct: 234 PCKPELGQVCVIIGGTWRC 252


>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
           protein K08E5.3a protein.
          Length = 3767

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 22/79 (27%), Positives = 35/79 (44%)
 Frame = +2

Query: 452 KRIFNTHFLDSESERPDSLSETLNAFLTENCNYHYSNVSLLLDIVLTQSLPVFFFFEFMA 631
           K + +T  +D   +  D   E +N  LT NC  + + V++  + +   SL    F     
Sbjct: 178 KCVSDTFIMDGNWDCEDGSDEFINKTLTANCTRN-NKVNIATNSL---SLGKLKFCSGKN 233

Query: 632 WYLGPLGQLPVFMGGCWGC 688
                LGQ+ V +GG W C
Sbjct: 234 PCKPELGQVCVIIGGTWRC 252


>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
           cell adhesion receptorMUA-3 precursor protein.
          Length = 3767

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 22/79 (27%), Positives = 35/79 (44%)
 Frame = +2

Query: 452 KRIFNTHFLDSESERPDSLSETLNAFLTENCNYHYSNVSLLLDIVLTQSLPVFFFFEFMA 631
           K + +T  +D   +  D   E +N  LT NC  + + V++  + +   SL    F     
Sbjct: 178 KCVSDTFIMDGNWDCEDGSDEFINKTLTANCTRN-NKVNIATNSL---SLGKLKFCSGKN 233

Query: 632 WYLGPLGQLPVFMGGCWGC 688
                LGQ+ V +GG W C
Sbjct: 234 PCKPELGQVCVIIGGTWRC 252


>Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical
           protein T06D8.2 protein.
          Length = 708

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 22/91 (24%), Positives = 43/91 (47%)
 Frame = +2

Query: 389 PDRIRGR*PETFSLADSSSGAKRIFNTHFLDSESERPDSLSETLNAFLTENCNYHYSNVS 568
           PD+ RG      SL      AK I++ HF ++  E  + + E +++   E  + ++ ++S
Sbjct: 451 PDQ-RGNVRSAISLFGLEPIAK-IYSKHF-ENRKEGIEEIREKIDSLSAEKTSKYFESIS 507

Query: 569 LLLDIVLTQSLPVFFFFEFMAWYLGPLGQLP 661
            LL  +L + L   +    + W+     +LP
Sbjct: 508 CLLAHLLKEPLFTVYKDVLLLWHHFCTSRLP 538


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,899,470
Number of Sequences: 27780
Number of extensions: 341608
Number of successful extensions: 721
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)