Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_P02
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0155 - 20712601-20713553,20713618-20714000,20714240-207142... 32 0.61
07_03_0682 + 20667365-20667655 31 0.81
09_02_0039 + 3293904-3294584 31 1.4
12_02_0634 + 21416205-21416954 29 3.3
04_03_0642 + 18289461-18290897,18291586-18291666 29 4.3
04_03_0029 - 9714031-9714072,9714196-9714219,9714343-9714406,971... 29 4.3
06_03_0213 - 18063536-18063707,18063786-18064186,18064317-18064706 28 7.6
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 28 7.6
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 28 10.0
10_08_0788 + 20553587-20553726,20554131-20554196,20554695-205549... 28 10.0
09_04_0506 - 18188785-18190599 28 10.0
07_01_0657 - 4915264-4915386,4915586-4915714,4917773-4917859,491... 28 10.0
04_03_0297 + 14060687-14060787,14061341-14061473,14061566-140617... 28 10.0
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 28 10.0
01_06_0948 - 33242219-33242530,33242632-33242782,33242874-332431... 28 10.0
>11_06_0155 -
20712601-20713553,20713618-20714000,20714240-20714271,
20714315-20714571,20714699-20714724,20714894-20715081,
20715302-20715595,20715714-20715752,20715827-20715944,
20716076-20716157,20716610-20716668,20717156-20717221,
20717358-20717447,20718142-20718236
Length = 893
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 207 HEYGQSLKLDAHVDSYGDRLLWGNNGNVDGNPGYFGWV 94
H+ +LK DAH S+ +W VD P +GW+
Sbjct: 280 HKISTTLKKDAHARSFECGQIWALYSEVDKFPKLYGWI 317
>07_03_0682 + 20667365-20667655
Length = 96
Score = 31.5 bits (68), Expect = 0.81
Identities = 27/71 (38%), Positives = 32/71 (45%)
Frame = -1
Query: 334 GHERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRAESEAGRARGQLRR 155
G RRR R + G Q R RP VEA G R+R T R R + GR R R
Sbjct: 10 GQSRRRTRTSD--GGQSQTRRRPVVEARQ-GGGSRRRRTER--RWGRDGRPGRCRSGAER 64
Query: 154 PPALGKQWKRR 122
A+G +RR
Sbjct: 65 -EAVGADDERR 74
>09_02_0039 + 3293904-3294584
Length = 226
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = -1
Query: 337 AGHERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRAESEAGRARGQLR 158
+G RRR RR+ + E E ++ + G+ + + AE E ARG
Sbjct: 19 SGARRRRQRRRSATATAVAEAETAALGDGNSARGEAEAPKDGDVMAAAE-EVEAARGGEA 77
Query: 157 RPPALGKQWKRRW 119
G WKRRW
Sbjct: 78 EVAGDGDGWKRRW 90
>12_02_0634 + 21416205-21416954
Length = 249
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = -1
Query: 343 PEAGHERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRAESEAGRAR 170
PE RR+VR + F++ E + ++ R R R P +R GR R
Sbjct: 69 PEEMSTRRKVRPARATVFRRCSGEEEVIPGMRAASWSRGRWWRRRPALRGRGRGGRRR 126
>04_03_0642 + 18289461-18290897,18291586-18291666
Length = 505
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -2
Query: 309 DRKAWGSNNSNEKGHLWKLTPVVLETGNVLLIENHEYGQSLKLDAHVDSYGDRL 148
DR W S+ E GHL ++ VV + + LL E + Y +K+ A + D L
Sbjct: 6 DRLEWHSHKETEAGHLRQIKDVVYDAED-LLDEYNYYALKVKVKASKNLGQDHL 58
>04_03_0029 -
9714031-9714072,9714196-9714219,9714343-9714406,
9714763-9715007,9715258-9715579,9715727-9715951,
9716067-9716233,9716340-9716456,9716547-9716723,
9716866-9716961,9717083-9717299,9717385-9717503,
9717591-9717783,9717913-9718067,9718160-9718292,
9718846-9718946
Length = 798
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 357 EYTMYLKLDMNVEEYGDRKAWGSNNSNEKGHLWKLTPVV 241
+YT YLK + +E+G K WG K L L+ V+
Sbjct: 224 KYTPYLKFEQRFQEWGLEKGWGDTAERCKETLNCLSEVL 262
>06_03_0213 - 18063536-18063707,18063786-18064186,18064317-18064706
Length = 320
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = -1
Query: 319 RVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRAESEAGRARGQLRRP 152
RV + + +RP+ A A DR R+T +P+ + G+ + L P
Sbjct: 100 RVTARPTTALGSRPPKRPASAPSAPPAQDRHRITLDKPKAKGRGRGGKVQASLLAP 155
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -1
Query: 325 RRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRAESEAGRARGQLRRPPA 146
+RRVR SV +Q R RP+ E R T R R + + E G RG+ P+
Sbjct: 49 QRRVRAAPSVPAKQAARPRPAGE------NGRTTTTRRRRRRKQQGEEGEERGERGCVPS 102
Query: 145 L 143
+
Sbjct: 103 M 103
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.9 bits (59), Expect = 10.0
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -1
Query: 340 EAGHERRRVRRQESVGFQQ-LERERPSVEADACSAGDRQRLTHREPRVRAE-SEAGRARG 167
E G RRR R + R R S ++D GDR R HR +E S+ GR+R
Sbjct: 97 EGGDRRRRPSRVSDDDKEGGRRRRRRSTDSDD-ERGDRHRRRHRRRSPSSESSDGGRSRR 155
Query: 166 QLRRPPALGKQWKRR 122
R + ++ +RR
Sbjct: 156 HRRDESSRRQRDERR 170
>10_08_0788 +
20553587-20553726,20554131-20554196,20554695-20554926,
20555033-20555237,20555335-20555441
Length = 249
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 321 EEYGDRKAWGSNNSNEKGHLW-KLTPVVLETGNVLLIEN 208
+ Y D K W N N + H+W + P GN L+ N
Sbjct: 6 DSYIDGKGWEQENQNSRKHIWQRHGPDRERNGNSKLVVN 44
>09_04_0506 - 18188785-18190599
Length = 604
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = -1
Query: 328 ERRRVRRQESVGFQQLERERPSVEADACSAGDRQRLTHREPRVRAESEAGRARGQLRRPP 149
ER R R +E + +RER D GD R RE + + GR+ G+ R
Sbjct: 532 ERERDRDRERERERDRDRERERYRDDRDRHGDYHRHGKRESDRNEDWDRGRSSGRRSRSR 591
Query: 148 ALGKQWKRR 122
+ +RR
Sbjct: 592 EVDHSKRRR 600
>07_01_0657 -
4915264-4915386,4915586-4915714,4917773-4917859,
4918220-4918368,4918498-4918555,4918632-4920614,
4922064-4922123
Length = 862
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 375 YKILNTEYTMYLKLDMNVEEYGDRKAWGSNNSNEKGHLWKLTPVVLETGN 226
+++LN+E + LD N+E GDR A K HL + V GN
Sbjct: 390 FELLNSENILDSSLDPNLEGLGDRHANVILKDISKEHLLDIPHVSSACGN 439
>04_03_0297 +
14060687-14060787,14061341-14061473,14061566-14061720,
14061850-14062042,14062130-14062248,14062332-14062548,
14062670-14062765,14062908-14063084,14063175-14063291,
14063398-14063564,14063680-14063904,14064052-14064373,
14064624-14064868,14065227-14065290,14065414-14065437,
14065561-14065602
Length = 798
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 357 EYTMYLKLDMNVEEYGDRKAWGSNNSNEKGHLWKLTPVV 241
+YT YLK + +E+G + WG K L L+ V+
Sbjct: 224 KYTPYLKFEQRFQEWGLERGWGDTAERCKETLNCLSEVL 262
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -2
Query: 291 SNNSNEKGHLWKLTPVVLETGNVLLIENH--EYGQSLKLDAHVDSY 160
SN+ N HL L+P L T N L N LD V SY
Sbjct: 239 SNDHNSDSHLRSLSPYALVTRNTTLFSNQISPKESGFPLDGSVTSY 284
>01_06_0948 -
33242219-33242530,33242632-33242782,33242874-33243111,
33243196-33243298,33243323-33243406,33243640-33243815,
33243943-33244074,33248406-33248967,33249084-33249842
Length = 838
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +3
Query: 153 GRRSCPRARPASDSARTRGSL*VRRCRSPALQASASTDGLSRSSCWNPTL-SCLRTLLRS 329
GR C R+ P T G + V + P + S GLS C L +C T S
Sbjct: 336 GRAGCVRSTPLDCQNGTDGFVAVEHAKVPDTERSVVDLGLSLEQCRKACLMNCSCTAYAS 395
Query: 330 CPASG 344
SG
Sbjct: 396 ANVSG 400
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,371,715
Number of Sequences: 37544
Number of extensions: 463016
Number of successful extensions: 1778
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1777
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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