Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_P02
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80841-1|AAB37939.1| 477|Caenorhabditis elegans Hypothetical pr... 37 0.019
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 30 2.2
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 30 2.2
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 30 2.2
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 30 2.2
Z70750-10|CAA94746.1| 439|Caenorhabditis elegans Hypothetical p... 29 2.9
U41558-1|AAK39248.1| 333|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81078-4|CAJ15165.1| 392|Caenorhabditis elegans Hypothetical pr... 29 3.9
U00042-3|AAM97940.1| 175|Caenorhabditis elegans Hypothetical pr... 28 9.0
>U80841-1|AAB37939.1| 477|Caenorhabditis elegans Hypothetical
protein C13A10.1 protein.
Length = 477
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -2
Query: 261 WKLTPVV-LETGNVLLIENHEYGQSLKLDAHVDSYGDRLLWGNNGNVDGNPGYFGWVINA 85
W P++ L T + L E++ G S +LD V ++G+ +L+ GN+ N Y+G +NA
Sbjct: 320 WLKNPILNLMTSSEFLTEDYGSGPSWRLDTVVSTHGNLVLYDRYGNLT-NVIYYGMNVNA 378
Query: 84 WQ 79
Q
Sbjct: 379 TQ 380
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 29.9 bits (64), Expect = 2.2
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
Frame = +2
Query: 77 YCHALMTQPKYPGLPSTFPLFPQSRRSP*LSTCASSFRLCPYSWFSMSKTL--PVSSTTG 250
YC YP PS S R L +++ L PYS S + L P+S G
Sbjct: 500 YCSLPQQNDYYP--PSMSGSSVSSSRQEDLMMHSNNNILPPYSTKSAQEPLQLPLSIQIG 557
Query: 251 VSFHRWPFSFELLEPHAFLSPYSSTFMSSFRYIVY------SVFNILYSSLLFSHTGINF 412
++ W F E++ A S STF S Y +Y N YS FS NF
Sbjct: 558 -DYNVWDFLAEVMSNRAATSSEMSTFRLSPAYSLYLALRSFHTHNKPYSVQFFSRIESNF 616
Query: 413 Q 415
+
Sbjct: 617 K 617
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 29.9 bits (64), Expect = 2.2
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
Frame = +2
Query: 77 YCHALMTQPKYPGLPSTFPLFPQSRRSP*LSTCASSFRLCPYSWFSMSKTL--PVSSTTG 250
YC YP PS S R L +++ L PYS S + L P+S G
Sbjct: 500 YCSLPQQNDYYP--PSMSGSSVSSSRQEDLMMHSNNNILPPYSTKSAQEPLQLPLSIQIG 557
Query: 251 VSFHRWPFSFELLEPHAFLSPYSSTFMSSFRYIVY------SVFNILYSSLLFSHTGINF 412
++ W F E++ A S STF S Y +Y N YS FS NF
Sbjct: 558 -DYNVWDFLAEVMSNRAATSSEMSTFRLSPAYSLYLALRSFHTHNKPYSVQFFSRIESNF 616
Query: 413 Q 415
+
Sbjct: 617 K 617
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 29.9 bits (64), Expect = 2.2
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
Frame = +2
Query: 77 YCHALMTQPKYPGLPSTFPLFPQSRRSP*LSTCASSFRLCPYSWFSMSKTL--PVSSTTG 250
YC YP PS S R L +++ L PYS S + L P+S G
Sbjct: 500 YCSLPQQNDYYP--PSMSGSSVSSSRQEDLMMHSNNNILPPYSTKSAQEPLQLPLSIQIG 557
Query: 251 VSFHRWPFSFELLEPHAFLSPYSSTFMSSFRYIVY------SVFNILYSSLLFSHTGINF 412
++ W F E++ A S STF S Y +Y N YS FS NF
Sbjct: 558 -DYNVWDFLAEVMSNRAATSSEMSTFRLSPAYSLYLALRSFHTHNKPYSVQFFSRIESNF 616
Query: 413 Q 415
+
Sbjct: 617 K 617
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 29.9 bits (64), Expect = 2.2
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
Frame = +2
Query: 77 YCHALMTQPKYPGLPSTFPLFPQSRRSP*LSTCASSFRLCPYSWFSMSKTL--PVSSTTG 250
YC YP PS S R L +++ L PYS S + L P+S G
Sbjct: 500 YCSLPQQNDYYP--PSMSGSSVSSSRQEDLMMHSNNNILPPYSTKSAQEPLQLPLSIQIG 557
Query: 251 VSFHRWPFSFELLEPHAFLSPYSSTFMSSFRYIVY------SVFNILYSSLLFSHTGINF 412
++ W F E++ A S STF S Y +Y N YS FS NF
Sbjct: 558 -DYNVWDFLAEVMSNRAATSSEMSTFRLSPAYSLYLALRSFHTHNKPYSVQFFSRIESNF 616
Query: 413 Q 415
+
Sbjct: 617 K 617
>Z70750-10|CAA94746.1| 439|Caenorhabditis elegans Hypothetical
protein C50F4.12 protein.
Length = 439
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 562 EIKLITKQERVKIIGRYYNQALKLDSNVDSYNNRLAWGDSQ 440
E+K TK ER+KI+ Y L+ NV ++RL W Q
Sbjct: 232 ELKKFTKSERLKIVDEY---RYWLNCNVQLIDSRLGWLQQQ 269
>U41558-1|AAK39248.1| 333|Caenorhabditis elegans Hypothetical
protein K02B2.3 protein.
Length = 333
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 266 WPFSFELLEPHAFLSPYSSTFMSSFRYIVYSVFNILYSS 382
W +S++++EP + + Y ST ++F Y +Y+ + Y S
Sbjct: 235 WEYSWDIMEPVTYFATY-STVCATFGYYLYTQQSFEYPS 272
>Z81078-4|CAJ15165.1| 392|Caenorhabditis elegans Hypothetical
protein F36H2.5 protein.
Length = 392
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 252 SASTDGLSRSSCWNPTL-SCLRTLLRSCPASG 344
S S L + WNP +C+ TLLR PA G
Sbjct: 196 SGSASSLCTNGVWNPLPGTCIATLLRKPPAKG 227
>U00042-3|AAM97940.1| 175|Caenorhabditis elegans Hypothetical
protein T04A6.1a protein.
Length = 175
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 296 HAFLSPYSSTFMSSFRYIVYSVFNILYSSLLFSHTGINFQLTL*LILSLAVSPGQAVVVR 475
H P+ STF SSF++ V S ++ Y ++ + F TL ++L L + + +++R
Sbjct: 101 HHLRLPFVSTFHSSFKFQVTSTLDVFYITIF-----LGFVSTLLILLFLGLDMLKFMLLR 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,956,725
Number of Sequences: 27780
Number of extensions: 386553
Number of successful extensions: 1171
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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