Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O24
(861 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.12 |||ribose 5-phosphate isomerase |Schizosaccharomyces ... 30 0.49
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy... 27 2.6
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.4
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 27 4.5
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 27 4.5
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 6.0
SPAC8E11.08c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 6.0
>SPAC144.12 |||ribose 5-phosphate isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 274
Score = 29.9 bits (64), Expect = 0.49
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 257 GKHKNSLE-HAKLKLLHAVNIQLGLFCHLMNIMYMGT 364
G KN E AK+KLL V +++GLFC +++ +Y G+
Sbjct: 198 GLIKNPKELFAKIKLLVGV-VEVGLFCDMISAVYFGS 233
>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 427
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 331 E*TQLDINSVQ*LQFGVFQAVF-VFTRGLQRIMIFMS 224
E +++D NS L FGVFQ+VF + GL ++ + +S
Sbjct: 45 ESSRVDRNSKLGLSFGVFQSVFSLLFSGLHKLWMILS 81
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 521 SKPVTEQRVNNASTAVTYT--IRASMPFDSSS 610
S P+T V N+STA+T + + +S P SSS
Sbjct: 3081 STPITSSSVLNSSTAITSSSIVNSSTPITSSS 3112
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 521 SKPVTEQRVNNASTAVTYT--IRASMPFDSSS 610
S P+T V N+STA+T + + +S P SSS
Sbjct: 3165 STPITSSSVLNSSTAITSSSIVNSSTPITSSS 3196
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 521 SKPVTEQRVNNASTAVTYT--IRASMPFDSSS 610
S P+T V N+STA+T + + +S P SSS
Sbjct: 3105 STPITSSSVLNSSTAITSSSILNSSTPITSSS 3136
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 521 SKPVTEQRVNNASTAVTYT--IRASMPFDSSS 610
S P+T V N+STA+T + + +S P SSS
Sbjct: 3213 STPITSSSVLNSSTAITSSSVLNSSTPITSSS 3244
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 521 SKPVTEQRVNNASTAVTYT--IRASMPFDSSS 610
S P+T V N+STA+T + + S P SSS
Sbjct: 693 STPITSSSVLNSSTAITSSTALNTSTPITSSS 724
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 521 SKPVTEQRVNNASTAVTYT--IRASMPFDSSS 610
S P+T V N+STA+T + + S P SSS
Sbjct: 1005 STPITSSSVLNSSTAITSSTALNTSTPITSSS 1036
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 521 SKPVTEQRVNNASTAVTYT--IRASMPFDSSS 610
S P+T V N+STA+T + + S P SSS
Sbjct: 3309 STPITSSSVLNSSTAITSSTALNTSTPITSSS 3340
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 521 SKPVTEQRVNNASTAVTYT--IRASMPFDSSS 610
S P+T V N+STA+T + + +S P SSS
Sbjct: 3333 STPITSSSVLNSSTAITSSSILNSSTPVTSSS 3364
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 544 PLLGDRLAVDALHATTPPATDPRQSRPA 461
PL G+ ++DA +A++ T P SRP+
Sbjct: 265 PLAGEGASIDAENASSRQETTPSDSRPS 292
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 469 ETDADRSLEAWSRVAHPQQAGHRAEGEQRF 558
ET+ D+ L W R+A ++ GE +F
Sbjct: 63 ETECDQKLRNWKRLAIEREVSEEQSGEVQF 92
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +2
Query: 140 LDRSSKSYTQNKNSI---PIWYVHKC 208
LD S+ +Y + S+ P WY+H C
Sbjct: 498 LDNSANNYLYGRQSMAAAPAWYIHGC 523
>SPAC8E11.08c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 100
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 522 LWMRYTRPRLQRPIRVSLVLPAIFLITCTFIVICS 418
+W+ R + L+ P+IFL+ C + ICS
Sbjct: 48 IWLLPYRKDYNEKFKGILINPSIFLLGCHHVQICS 82
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,039,913
Number of Sequences: 5004
Number of extensions: 62061
Number of successful extensions: 183
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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