Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_O23
         (865 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    26   9.5  
BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    26   9.5  

>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 26.2 bits (55), Expect(2) = 9.5
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 674 PPXSXXXXPXXPXXXXXXXXPPXPPPP 754
           PP +    P  P        PP PPPP
Sbjct: 220 PPGTGPPGPPGPPGTTYPQPPPPPPPP 246



 Score = 21.0 bits (42), Expect(2) = 9.5
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 734 PPXPPPPXXRXXP 772
           PP PPPP     P
Sbjct: 244 PPPPPPPPSYPYP 256


>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 26.2 bits (55), Expect(2) = 9.5
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 674 PPXSXXXXPXXPXXXXXXXXPPXPPPP 754
           PP +    P  P        PP PPPP
Sbjct: 218 PPGTGPPGPPGPPGTTYPQPPPPPPPP 244



 Score = 21.0 bits (42), Expect(2) = 9.5
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 734 PPXPPPPXXRXXP 772
           PP PPPP     P
Sbjct: 243 PPPPPPPSYPYPP 255


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,368,186
Number of Sequences: 53049
Number of extensions: 403902
Number of successful extensions: 1753
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)