Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O20
(828 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 25 1.1
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 25 1.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 2.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.4
AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced prot... 23 3.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 4.6
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 4.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 6.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 6.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 8.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 8.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 8.0
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 673 ARVACLKXRSPFDIDANGILNVSAIEKSTNQ 581
A AC+ + FD N I N+ I KSTN+
Sbjct: 41 ANRACILIKDLFDNVHNHIQNIFKIIKSTNE 71
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 673 ARVACLKXRSPFDIDANGILNVSAIEKSTNQ 581
A AC+ + FD N I N+ I KSTN+
Sbjct: 24 ANRACILIKDLFDNVHNHIQNIFKIIKSTNE 54
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 578 SLVGGLLDSGNVEDTVGID 634
SL GGL D G V V +D
Sbjct: 463 SLAGGLYDEGTVRRRVAVD 481
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 3.4
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 609 TLRIPLASMSKGDLXLRHATRAPGGDPGSAXNLPSQVXXLLXX*PRPTPQNT 764
T R+P A +S+ + L + GG P A P+++ P P T
Sbjct: 375 TQRLP-AVLSRIGIILASPLKREGGPPTGATTGPNEIVTCTNCGPNPCTHTT 425
>AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced protein
75 protein.
Length = 36
Score = 23.0 bits (47), Expect = 3.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 645 HLSTSMPTVSSTFPLSRSPP 586
HLS +MPT+ ST ++ P
Sbjct: 13 HLSPNMPTMDSTVSSAKPEP 32
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = -2
Query: 674 RPRGVPQXEVTFRHRCQRYPQRFRYREVHQPRRTRSPLP 558
RP+G+ + Q+Y + F ++ +++ R+ LP
Sbjct: 225 RPKGINGRRASLFCGLQKYTRSFAHQSINKEARSNLYLP 263
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = -2
Query: 674 RPRGVPQXEVTFRHRCQRYPQRFRYREVHQPRRTRSPLP 558
RP+G+ + Q+Y + F ++ +++ R+ LP
Sbjct: 220 RPKGINGRRASLFCGLQKYTRSFAHQSINKEARSNLYLP 258
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 664 PRGRPVGIPGQLXIY 708
PRG+ G+P QL +Y
Sbjct: 607 PRGKKEGMPFQLFLY 621
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 664 PRGRPVGIPGQLXIY 708
PRG+ G+P QL +Y
Sbjct: 607 PRGKKEGMPFQLFLY 621
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 565 HYQRQRSSLQGRDRAY 518
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 565 HYQRQRSSLQGRDRAY 518
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 565 HYQRQRSSLQGRDRAY 518
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 565 HYQRQRSSLQGRDRAY 518
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 565 HYQRQRSSLQGRDRAY 518
HY R+RS + R+R Y
Sbjct: 219 HYSRERSCSRDRNREY 234
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 565 HYQRQRSSLQGRDRAY 518
HY R+RS + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 19/104 (18%), Positives = 37/104 (35%)
Frame = -1
Query: 546 RLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQ 367
+L E+ + + + RN +++E KN E + S E+ + +
Sbjct: 20 KLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERSRDRTERERSREPK 79
Query: 366 TILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXP 235
I N+TI + + Y + + YN I + P
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNIINIEQIP 123
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 19/104 (18%), Positives = 37/104 (35%)
Frame = -1
Query: 546 RLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQ 367
+L E+ + + + RN +++E KN E + S E+ + +
Sbjct: 20 KLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERSRDRAERERSREPK 79
Query: 366 TILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMXP 235
I N+TI + + Y + + YN I + P
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNIINIEQIP 123
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -3
Query: 598 EKSTNQGEQDHHYQRQRSSLQGRDR 524
E+++ + E+++ R+RS + RDR
Sbjct: 279 EQNSYKNEREYRKYRERSKERSRDR 303
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,162
Number of Sequences: 438
Number of extensions: 4577
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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