Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O17
(865 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 110 1e-24
02_04_0017 + 18937774-18937864,18938505-18940945 110 1e-24
01_06_0662 + 30987187-30987277,30987825-30990214 109 3e-24
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 99 5e-21
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 82 5e-16
03_05_0511 + 25056018-25059107 52 4e-07
02_04_0148 - 20198407-20201424 50 2e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 41 0.001
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 35 0.096
07_01_0886 - 7356591-7356662,7357002-7357079,7357373-7357444,735... 32 0.68
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 32 0.68
05_02_0085 - 6465126-6466049 29 6.3
12_02_0873 - 23892193-23892290,23892931-23893111 28 8.4
11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075 28 8.4
11_06_0364 - 22727978-22729149,22730475-22730727,22731628-227319... 28 8.4
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 110 bits (265), Expect = 1e-24
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = -2
Query: 732 LHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRG 553
LH DAIHRGGGQ+IPT RR +YA LTA+PR +EPVYL EIQ PE A+GGIYGVLN++RG
Sbjct: 694 LHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRG 753
Query: 552 HVFEE 538
HVFEE
Sbjct: 754 HVFEE 758
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = -3
Query: 533 QVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQ 357
Q GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ P+ S QA Q
Sbjct: 760 QRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQ 818
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 388 DPCEPQSKPYNVVQETRKRKGLKE 317
DP E S+ +V + RKRKGLKE
Sbjct: 808 DPLEVSSQANQLVLDIRKRKGLKE 831
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 110 bits (265), Expect = 1e-24
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = -2
Query: 732 LHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRG 553
LH DAIHRGGGQ+IPT RR +YA LTA+PR +EPVYL EIQ PE A+GGIYGVLN++RG
Sbjct: 694 LHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRG 753
Query: 552 HVFEE 538
HVFEE
Sbjct: 754 HVFEE 758
Score = 78.6 bits (185), Expect = 6e-15
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = -3
Query: 533 QVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQA 363
Q GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ P+ QA
Sbjct: 760 QRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQA 816
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 388 DPCEPQSKPYNVVQETRKRKGLKE 317
DP E S+ +VQ+ RKRKGLKE
Sbjct: 808 DPLEAGSQASTLVQDIRKRKGLKE 831
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 109 bits (262), Expect = 3e-24
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = -2
Query: 732 LHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRG 553
LH+DAIHRGGGQIIPT RR +YA LTA+PR +EPVYL EIQ PE A+GGIY VLN++RG
Sbjct: 692 LHSDAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRG 751
Query: 552 HVFEE 538
HVFEE
Sbjct: 752 HVFEE 756
Score = 71.3 bits (167), Expect = 9e-13
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = -3
Query: 533 QVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQAL 360
Q GTP++ +KAYLPV ESFGFT+ LR+ T GQAFP VFDHW++L P+ + L
Sbjct: 758 QRPGTPLYNIKAYLPVIESFGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTRQL 815
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 98.7 bits (235), Expect = 5e-21
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = -2
Query: 735 TLHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRR 556
TLH+D+IHRGGGQ+IPT RR +YA LTA PR MEP+Y +IQ P+ AVG +YGVLN R
Sbjct: 703 TLHSDSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRN 762
Query: 555 GHVFEES 535
G + EES
Sbjct: 763 GELVEES 769
Score = 66.5 bits (155), Expect = 3e-11
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = -3
Query: 524 GTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTG 345
GTP+ ++ YLPV +SF FT LR+ T GQAFPQC+F HWQ + P + +A + T
Sbjct: 773 GTPLSNLRFYLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITD 832
Query: 344 NEKEERIE 321
K + ++
Sbjct: 833 IRKRKGLK 840
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 82.2 bits (194), Expect = 5e-16
Identities = 43/81 (53%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -2
Query: 723 DAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 544
+ +HRGGGQIIPT RR +Y+ L A PR MEPVY EIQ P V IY VL+RRRGHV
Sbjct: 823 EPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVT 882
Query: 543 EESP-GGRYTYVHCEGLPTCQ 484
+ P G YV LP +
Sbjct: 883 ADVPKPGTPIYVVKAFLPVIE 903
Score = 68.5 bits (160), Expect = 6e-12
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = -3
Query: 524 GTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPV 381
GTP+++VKA+LPV ESFGF DLR +T GQAF VFDHW ++P P+
Sbjct: 889 GTPIYVVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPL 936
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/53 (47%), Positives = 30/53 (56%)
Frame = -3
Query: 542 KSPQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRP 384
K GT +F V AYLPV ES GF+ +LRS T G A V HW+ +P P
Sbjct: 920 KEEMQEGTSLFTVHAYLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = -2
Query: 729 HTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRGH 550
H++ + GQ+I + ++ +PR +E +Y CE+ P +G Y VL+R+R
Sbjct: 858 HSEQYNIFSGQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRAR 917
Query: 549 VFEE 538
V +E
Sbjct: 918 VLKE 921
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -2
Query: 702 GQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 538
GQII R A +L ++PR +EP+Y CE+ P +G +Y VL R V +E
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKE 897
Score = 44.8 bits (101), Expect = 9e-05
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -3
Query: 542 KSPQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRP 384
K GT +F V AYL V ES F+ LR+ T G A F HW+ +P P
Sbjct: 896 KEEMQEGTSLFTVHAYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -2
Query: 660 LLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV--FEESPGG 526
L A PR +EP+ E+ PE +G + G LN RRG V F + PGG
Sbjct: 644 LRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPGG 690
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 34.7 bits (76), Expect = 0.096
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 663 CLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESPGGRYTYVHC 505
C A+P +EPV E++ P G + G +N+R+G + G T V C
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDTVVVC 717
>07_01_0886 -
7356591-7356662,7357002-7357079,7357373-7357444,
7357511-7357600,7357669-7357783,7358509-7358639,
7358717-7358992,7360147-7360283,7360368-7360502,
7360958-7361325,7362111-7362229,7362295-7362339
Length = 545
Score = 31.9 bits (69), Expect = 0.68
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -1
Query: 586 WYLRC--TEQTSWSRFRRVPRWQVHLCSL*RPTYLSMSRSVLLPICVPTPADRPSRSAYS 413
++ +C E RR+PR + LC+ T S SR VP P PS S
Sbjct: 19 YHAKCPVAEDVVLGEMRRIPRSR-RLCTGCITTTASSSRRS----SVPLPLPDPSSSRSE 73
Query: 412 TIGRSSPGDPCEPQSKPYNVVQETRKRK 329
T S GD E +S+ + RKRK
Sbjct: 74 TSAVRSEGDAAEEKSEEQRPGRRRRKRK 101
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 31.9 bits (69), Expect = 0.68
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 654 TAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESPGG 526
T + EP + ++ PE +G + +L +RRG + + P G
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSG 539
>05_02_0085 - 6465126-6466049
Length = 307
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 433 PSRSAYSTIGRSSPGDPCEPQSKPYNVVQETRKRKGLKEGLP 308
P++ S + R++ G P +P P R+R+ L+ G P
Sbjct: 6 PTKQPLSPLPRAASGSPTKPTPSPSPSPASARRRRVLRRGSP 47
>12_02_0873 - 23892193-23892290,23892931-23893111
Length = 92
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 484 MSRSVLLPICVPTPADRPSRSAYSTIGRSSPGDPCEPQSK--PYNVVQETRKRKG 326
M R + LP+C P + R S + + DP P S+ P V R++ G
Sbjct: 1 MRRWIRLPLCAPCTWIQLQRRGSSAVAGGASADPAPPSSRMDPARVKTMGRRQDG 55
>11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075
Length = 479
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 498 GLHNEHRCTCHLGTLRKRDHDVCSVHRRYHPQLLQDTEFHK 620
G H CTCH +R +D CS + Q L D HK
Sbjct: 434 GSMRPHYCTCHRKLMRSKDRVECSYCHNFF-QNLADYYRHK 473
>11_06_0364 - 22727978-22729149,22730475-22730727,22731628-22731963,
22732306-22732512,22734988-22735686,22736441-22736590,
22740204-22740962,22741023-22741235
Length = 1262
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 498 GLHNEHRCTCHLGTLRKRDHDVCSVHRRYHPQLLQDTEFHK 620
G H CTCH +R +D CS + Q L D HK
Sbjct: 1217 GSMRPHYCTCHRKLMRSKDRVECSYCHNFF-QNLADYYRHK 1256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,509,670
Number of Sequences: 37544
Number of extensions: 449903
Number of successful extensions: 1199
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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