Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O17
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 124 8e-29
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 124 8e-29
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 77 1e-14
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 77 1e-14
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 2.4
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 28 7.5
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 28 7.5
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 28 9.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 124 bits (299), Expect = 8e-29
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = -2
Query: 735 TLHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRR 556
TLH DAIHRGGGQIIPT RR YA +LTA+PR +EPVYL EIQCPE AVGGIYGVLNRRR
Sbjct: 702 TLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRR 761
Query: 555 GHVFEES 535
GHVFEES
Sbjct: 762 GHVFEES 768
Score = 109 bits (263), Expect = 2e-24
Identities = 50/79 (63%), Positives = 58/79 (73%)
Frame = -3
Query: 533 QVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQR 354
QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP P+ + Q
Sbjct: 769 QVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQI 828
Query: 353 CTGNEKEERIEGRSPRLNS 297
K + ++ P L++
Sbjct: 829 VLDTRKRKGLKEGVPALDN 847
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 124 bits (299), Expect = 8e-29
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = -2
Query: 735 TLHTDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRR 556
TLH DAIHRGGGQIIPT RR YA +LTA+PR +EPVYL EIQCPE AVGGIYGVLNRRR
Sbjct: 702 TLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRR 761
Query: 555 GHVFEES 535
GHVFEES
Sbjct: 762 GHVFEES 768
Score = 109 bits (263), Expect = 2e-24
Identities = 50/79 (63%), Positives = 58/79 (73%)
Frame = -3
Query: 533 QVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQR 354
QV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP P+ + Q
Sbjct: 769 QVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQI 828
Query: 353 CTGNEKEERIEGRSPRLNS 297
K + ++ P L++
Sbjct: 829 VLDTRKRKGLKEGVPALDN 847
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/65 (50%), Positives = 43/65 (66%)
Frame = -2
Query: 726 TDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 547
T+ ++RGGGQ+IPT RRC Y+ L A PR MEP Y E+ P V +Y VL +RRGHV
Sbjct: 802 TEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHV 861
Query: 546 FEESP 532
++P
Sbjct: 862 TTDAP 866
Score = 62.9 bits (146), Expect = 3e-10
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = -3
Query: 524 GTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTS 372
G+PM+ + AY+PV +SFGF DLR +T GQAF F HWQ++P P+ S
Sbjct: 869 GSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKS 919
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/65 (50%), Positives = 43/65 (66%)
Frame = -2
Query: 726 TDAIHRGGGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 547
T+ ++RGGGQ+IPT RRC Y+ L A PR MEP Y E+ P V +Y VL +RRGHV
Sbjct: 677 TEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHV 736
Query: 546 FEESP 532
++P
Sbjct: 737 TTDAP 741
Score = 62.9 bits (146), Expect = 3e-10
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = -3
Query: 524 GTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTS 372
G+PM+ + AY+PV +SFGF DLR +T GQAF F HWQ++P P+ S
Sbjct: 744 GSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKS 794
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = -3
Query: 521 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRT 375
T +F V + +PV ESF F LR T G A Q F HWQV+ P T
Sbjct: 604 TNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDPYWT 652
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = -3
Query: 521 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRT 375
T +F V + +PV ESF F LR T G A Q F HWQV+ P T
Sbjct: 793 TNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDPYWT 841
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -2
Query: 705 GGQIIPTXRRCLYACLLTAQPRXMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 538
GGQ++ + A R + +Y C + A+G ++ VL++R+ V E
Sbjct: 732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSE 787
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 159 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 278
+L+ LR+C+ C + TC K FP ++V L+ ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 448 TPADRPSRSAYSTIGRSSPGDPCEPQSKPYNVVQETR 338
TP+DR +S Y + G S+P P E PYN ++ R
Sbjct: 633 TPSDRVEKSRYLSRGVSTPHTPSEVHI-PYNNPEKER 668
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 396 EDLPMVEYALREGLSAGVGTQIGSKTERLID 488
ED+ +EY + E ++ +GTQ+ KT +D
Sbjct: 233 EDVTRIEYLIHEYQNSDIGTQMLKKTRTAVD 263
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 283 ICPNIELSLGDLPSI-LSSFSFPVQRCRACSEVRTGLQGRTCQWSNTHCGK 432
I P+ +GD+ + +SS FP RC+ E+ G+ S THCG+
Sbjct: 615 IGPSSRYLMGDITGLSMSSNDFPTFRCQ---EINIGMATGIRAISVTHCGE 662
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,589,501
Number of Sequences: 27780
Number of extensions: 389831
Number of successful extensions: 932
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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