Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_O15
         (809 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46676-9|CAA86665.2|  321|Caenorhabditis elegans Hypothetical pr...    44   2e-04
Z81454-2|CAB03804.2|  346|Caenorhabditis elegans Hypothetical pr...    29   5.2  

>Z46676-9|CAA86665.2|  321|Caenorhabditis elegans Hypothetical
           protein C08B11.7 protein.
          Length = 321

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
 Frame = -1

Query: 698 KDSQIIGDIYPTSTTALVRSNESPVLL-CSEIAPEQPYKLRKLLLSHSELNALMSCIVGE 522
           K+   I  I P     + + +E  +      + P +  KL++++ +  + N     +  +
Sbjct: 187 KEQDWIEAIKPVIQQRMQKYSEGEITFNLMALVPNRKQKLQEMMENLIQANENNE-LEEQ 245

Query: 521 VQSCQQALNDENDKRDMYKVDDCRRTHNYDEFICTFLSMLTERGALAELV 372
           +    +A+ DE+ K +MY+ ++ RR HNY  F+   + +L + G L  LV
Sbjct: 246 IADLNKAIADEDYKMEMYRKENNRRRHNYTPFVIELMKILAKEGKLVGLV 295


>Z81454-2|CAB03804.2|  346|Caenorhabditis elegans Hypothetical
           protein B0391.4 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 387 SSTFRQHR*ESADELVVVVRTSTIVYFIHISFIVLI 494
           S T R+H  +    LV+ + T TI+ FI I+ I+ +
Sbjct: 240 SETLRKHHKQFFKTLVLQITTPTIILFIPITIIIFL 275


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,400,495
Number of Sequences: 27780
Number of extensions: 279632
Number of successful extensions: 672
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)