Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O14
(807 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 261 9e-71
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 256 2e-69
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 104 1e-23
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 57 3e-09
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.25
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.4
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 7.2
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.2
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.2
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 26 7.2
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 9.6
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.6
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.6
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3... 25 9.6
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 261 bits (639), Expect = 9e-71
Identities = 114/142 (80%), Positives = 129/142 (90%)
Frame = -3
Query: 562 PPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 383
P QMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y
Sbjct: 302 PYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICY 361
Query: 382 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 203
+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGE
Sbjct: 362 EPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGE 421
Query: 202 FSEAREDLAALEKDYEEVGMDS 137
FSEAREDLAALE+DYEEVG DS
Sbjct: 422 FSEAREDLAALERDYEEVGQDS 443
Score = 120 bits (288), Expect = 3e-28
Identities = 55/77 (71%), Positives = 62/77 (80%)
Frame = -2
Query: 791 PNLHQPDXLIGQIVSSIXASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKA 612
P + LI Q+VSSI ASLRF G+LNVDL EFQTNLVPYPRIHFPLVTY+P++SA KA
Sbjct: 226 PTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKA 285
Query: 611 YHEQLSVAEITNACFEP 561
+HE SV EITN CFEP
Sbjct: 286 FHESNSVQEITNQCFEP 302
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 256 bits (628), Expect = 2e-69
Identities = 113/142 (79%), Positives = 127/142 (89%)
Frame = -3
Query: 562 PPXQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 383
P QMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI
Sbjct: 298 PYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICD 357
Query: 382 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 203
+PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGE
Sbjct: 358 RPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGE 417
Query: 202 FSEAREDLAALEKDYEEVGMDS 137
FSEAREDLAALE+DYEEVG DS
Sbjct: 418 FSEAREDLAALERDYEEVGQDS 439
Score = 123 bits (296), Expect = 3e-29
Identities = 56/77 (72%), Positives = 64/77 (83%)
Frame = -2
Query: 791 PNLHQPDXLIGQIVSSIXASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKA 612
P+ + LI Q+VSSI ASLRF+G+LNVDL EFQTNLVPYPRIHFPLVTYAP++SA KA
Sbjct: 222 PSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKA 281
Query: 611 YHEQLSVAEITNACFEP 561
+HE SV EITN CFEP
Sbjct: 282 FHESNSVQEITNQCFEP 298
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 104 bits (250), Expect = 1e-23
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Frame = -3
Query: 550 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 371
MV DPRHG+Y+ L+RG V K+V+ I +++TK + FV+W P + PP
Sbjct: 300 MVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK 359
Query: 370 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 191
DL + + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 -----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 190 R---EDLAALEKDYEEVGMD 140
DL + + Y+E G+D
Sbjct: 412 ESNMNDLVSEYQQYQEAGID 431
Score = 60.5 bits (140), Expect = 3e-10
Identities = 25/77 (32%), Positives = 46/77 (59%)
Frame = -2
Query: 794 APNLHQPDXLIGQIVSSIXASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 615
+P+ + L+ +++ + S RF G LN DL + N+VP+PR+HF +V +AP+ +
Sbjct: 219 SPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGS 278
Query: 614 AYHEQLSVAEITNACFE 564
+ + +SV E+T F+
Sbjct: 279 SSFQAVSVPELTQQMFD 295
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 57.2 bits (132), Expect = 3e-09
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Frame = -3
Query: 562 PPXQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 386
P QMV +P + +++ + +G+ P DV+ ++ I+ +R F+ W P +V ++
Sbjct: 302 PKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALS 361
Query: 385 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE- 209
+ P + ++ + ML+N T+IA + R ++D + + AF+ Y E + E
Sbjct: 362 KKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFED 416
Query: 208 --GEFSEAREDLAALEKDYE 155
EF +R+ +A L +YE
Sbjct: 417 DLNEFDSSRDVVADLINEYE 436
Score = 49.6 bits (113), Expect = 5e-07
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -2
Query: 791 PNLHQPDXLIGQIVSSIXASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAP 633
P HQ + L+ ++S+ +LR+ G +N DL +L+P PR HF L +Y P
Sbjct: 223 PTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTP 275
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 495 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 361
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 291 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 118
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 117 EPKSTK 100
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 459 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 373
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = -3
Query: 622 PRRPTMNSFPSPR----SQTHASSPPXQMVKCDPRH 527
P RP + + P P+ S HA PP Q + P H
Sbjct: 1356 PVRPAVPTSPKPQIPDSSNVHAPPPPVQPMNAMPSH 1391
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -3
Query: 700 SPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSP 560
SPS LT L S++ S + + + R+ T +S SP+ Q+ S+P
Sbjct: 619 SPSKMLT-TLRNNSSTFPSLRKNAMIARKSTADSLSSPKRQSVPSTP 664
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 478 WVRRHHGTAYSKPCTCHDGG 537
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 596 SVAEITNACFEPAXPDGEMRPPSWQV 519
SV ++T ACFEP+ ++ P W +
Sbjct: 800 SVTKVTCACFEPSLDYVVVKIPRWDL 825
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.4 bits (53), Expect = 9.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 634 QSSLPRRPTMNSFPSPRSQTHASSPP 557
+ SLPRRP+ +P S T ++ PP
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPP 763
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 462 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 367
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 9.6
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -1
Query: 540 ATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 373
+TPV ++ CT TS P T + S P +N +T S TS P
Sbjct: 437 STPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 25.4 bits (53), Expect = 9.6
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = -3
Query: 709 MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPS----PRSQTHASSPPXQMVK 542
+W PS + V T+H SS+ N+F S P ++H + +++
Sbjct: 27 LWPPPSLNESGDTRSVWTTHTGEPVASSVLSTSGSNNFSSPLKRPAPESHDAPIGRRLMV 86
Query: 541 CDPR---HGKY 518
DPR HGKY
Sbjct: 87 DDPRLIKHGKY 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,147,020
Number of Sequences: 5004
Number of extensions: 67815
Number of successful extensions: 262
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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