Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O13
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 44 1e-04
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 42 8e-04
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 41 0.001
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 41 0.001
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 40 0.002
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 39 0.004
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 38 0.007
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 38 0.007
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 34 0.11
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 34 0.11
11_01_0600 - 4780579-4780839,4781256-4781324,4781535-4781598,478... 29 3.2
05_03_0095 - 8349971-8350171,8350659-8351303 29 3.2
07_03_0390 + 17573653-17574089,17574250-17574280,17574397-17575134 28 7.5
04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814 28 7.5
04_03_0584 + 17546945-17547382 28 9.9
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = -1
Query: 705 LASAIVVITTSGKSAHLLSKYRPRCPIIAVTRHPQTARQVHLYRGVLPI 559
L + I+V T +G A LLS YRP I A T + +++ LY+GV+PI
Sbjct: 477 LCTPIIVFTRTGSMAVLLSHYRPSSTIFAFTNEERVKQRLALYQGVVPI 525
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = -1
Query: 711 KCLASAIVVITTSGKSAHLLSKYRPRCPIIAVTRHPQTARQVHLYRGVLP 562
K A+ V T +G A LLS+ RP CPI A T R+++L G++P
Sbjct: 481 KLEVDAVFVYTNTGHMASLLSRCRPDCPIFAFTTSTSVRRRLNLQWGLIP 530
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = -1
Query: 705 LASAIVVITTSGKSAHLLSKYRPRCPIIAVTRHPQTARQVHLYRGVLPI 559
L ++IVV T +G A LLS YRP I A T + +++ LY+GV P+
Sbjct: 503 LGTSIVVFTRTGFMAILLSHYRPSGTIFAFTDQERVRQRLALYQGVCPV 551
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Frame = -1
Query: 711 KCLASAIVVITTSGKSAHLLSKYRPRCPIIAVT-----------RHPQT--ARQVHLYRG 571
K A+AIVV T SG++A L++KY+P P++AV R T ARQ RG
Sbjct: 396 KVKAAAIVVFTFSGRAARLVAKYKPPMPVLAVVFPREGSDPTKWRSYGTTQARQCFAARG 455
Query: 570 VLPIVYQ-EPTASDWLKDVDNRVQSGLRFGRQRGFVQP 460
V P++ E + L + ++ +GR G ++P
Sbjct: 456 VYPLMASTEEAETGGLTREEYGIKLAQNYGRSVGMLKP 493
>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = -1
Query: 696 AIVVITTSGKSAHLLSKYRPRCPIIAVTRHPQTARQVHLYRGVLPI 559
AI V T G A LLS+ RP PI A T + + + ++LY GV+P+
Sbjct: 1065 AIFVYTKYGHMASLLSRNRPNPPIFAFTDNANSRKSMNLYWGVIPL 1110
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Frame = -1
Query: 711 KCLASAIVVITTSGKSAHLLSKYRPRCPIIAVTRHPQT-------------ARQVHLYRG 571
K A+ IVV+T G +A L++KYRPR PI++V T AR +YRG
Sbjct: 393 KAKAALIVVLTRGGTTAKLVAKYRPRVPILSVVVPVLTTDSFDWTISSEGPARHSLIYRG 452
Query: 570 VLPIVYQEPTASDWLKDVDNRVQSGLRFGRQRGFVQPRGQRGRRHRL 430
++P++ + + + + + + L+ Q+ +P HR+
Sbjct: 453 LVPLLAEGSAKATDSESTEVILDAALKSAVQKQLCKPGDAVVALHRI 499
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -1
Query: 711 KCLASAIVVITTSGKSAHLLSKYRPRCPIIAV 616
K AS I+ T+SG++A L++KYRP P+++V
Sbjct: 379 KVKASVIICFTSSGRAARLIAKYRPTMPVLSV 410
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -1
Query: 711 KCLASAIVVITTSGKSAHLLSKYRPRCPIIAV 616
K AS I+ T+SG++A L++KYRP P+++V
Sbjct: 379 KVKASVIICFTSSGRAARLIAKYRPTMPVLSV 410
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -1
Query: 702 ASAIVVITTSGKSAHLLSKYRPRCPIIAV 616
AS I+V+T G +A L++KYRP P++ V
Sbjct: 379 ASLILVLTRGGTTARLIAKYRPAMPVLFV 407
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = -1
Query: 702 ASAIVVITTSGKSAHLLSKYRPRCPIIAV 616
A+ I+V+T G +A L++KYRP PI++V
Sbjct: 488 AALILVLTRGGTTARLVAKYRPSMPILSV 516
>11_01_0600 -
4780579-4780839,4781256-4781324,4781535-4781598,
4781791-4781919,4782234-4782541
Length = 276
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 546 PTASDWLKDVDNRVQSGLRFGRQRGFVQPRGQRGRRHR 433
P S + D + +Q G+R GR+R +++ R +R R R
Sbjct: 26 PQRSPGIADFGDELQRGVRHGRRRTWLRRRARRRERRR 63
>05_03_0095 - 8349971-8350171,8350659-8351303
Length = 281
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 708 CLASAI-VVITTSGKSAHLLSKYRPRCPIIAVT 613
C+ +A+ +++ G +A L YRP+ P IAVT
Sbjct: 29 CVVAALFILLAAGGAAAALFLLYRPQAPAIAVT 61
>07_03_0390 + 17573653-17574089,17574250-17574280,17574397-17575134
Length = 401
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 589 LPGGLRVPGDGDDGAARPVLA 651
LPGG R GDG A P+LA
Sbjct: 230 LPGGYRSAGDGGSAAGTPLLA 250
>04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814
Length = 775
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -1
Query: 450 RGRRHRLEAGLRLHQHRPGHSIGIMTKLQRRRKSAFVL 337
R RRH E L LH H P ++T RR A VL
Sbjct: 54 RPRRHHHEDSLPLHVHLPPPPDALLTAAADRRSRADVL 91
>04_03_0584 + 17546945-17547382
Length = 145
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 504 QSGLRFGRQRGFVQPRGQRGRRHRLEAGLRLHQHRPGHSIG 382
+ G R G +G + RG RGRR+ GLR +Q R G G
Sbjct: 12 EPGRRKGWPKGRRRQRGWRGRRNARRRGLRTNQ-RAGRGGG 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,710,897
Number of Sequences: 37544
Number of extensions: 299612
Number of successful extensions: 781
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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