Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_O13
         (798 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.5  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   4.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   7.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   7.6  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    22   7.6  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 705 LASAIVVITTSGKSAHLLSKYR 640
           L   ++++T +  S H+LSKY+
Sbjct: 12  LFGVLLLLTNADNSVHILSKYQ 33


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 142 TNYYMYKRNVSRNCILVIGV 83
           TNYY++   +S   +LV+G+
Sbjct: 75  TNYYLFSLAISDLILLVLGL 94


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 142 TNYYMYKRNVSRNCILVIGV 83
           TNYY++   VS    L++G+
Sbjct: 68  TNYYLFNLAVSDLLFLILGL 87


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 495 LRFGRQRGFVQPRGQRGRRHRLEAGLRLH 409
           L  GR  GF++P        RL   +R+H
Sbjct: 218 LILGRHLGFLKPDSSSELATRLAEAVRIH 246


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +2

Query: 176 VMRP*IMLNSLRKKIVYDIFFVYGVFI 256
           VMRP +++ S+   ++  I  +YG+ +
Sbjct: 45  VMRPELIMKSIIPVVMAGIIAIYGLVV 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,784
Number of Sequences: 438
Number of extensions: 3103
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)