Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O12
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 358 e-100
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 357 2e-99
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 151 1e-37
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 85 2e-17
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.094
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.22
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.50
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.66
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 29 1.2
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.0
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.7
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 6.1
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 6.1
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 8.1
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 8.1
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 358 bits (881), Expect = e-100
Identities = 158/198 (79%), Positives = 178/198 (89%)
Frame = -2
Query: 723 LEFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQ 544
L F G+LNVDL EFQTNLVPYPRIHFPLVTY+P++SA KA+HE SV EITN CFEP NQ
Sbjct: 246 LRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQ 305
Query: 543 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 364
MVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP
Sbjct: 306 MVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQ 365
Query: 363 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 184
VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEA
Sbjct: 366 HVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEA 425
Query: 183 REDLAALEKDYEEVGMDS 130
REDLAALE+DYEEVG DS
Sbjct: 426 REDLAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 357 bits (877), Expect = 2e-99
Identities = 158/198 (79%), Positives = 177/198 (89%)
Frame = -2
Query: 723 LEFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQ 544
L F+G+LNVDL EFQTNLVPYPRIHFPLVTYAP++SA KA+HE SV EITN CFEP NQ
Sbjct: 242 LRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQ 301
Query: 543 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 364
MVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP
Sbjct: 302 MVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQ 361
Query: 363 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 184
+ G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEA
Sbjct: 362 HIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEA 421
Query: 183 REDLAALEKDYEEVGMDS 130
REDLAALE+DYEEVG DS
Sbjct: 422 REDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 151 bits (367), Expect = 1e-37
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 3/198 (1%)
Frame = -2
Query: 717 FDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 538
F G LN DL + N+VP+PR+HF +V +AP+ + + + +SV E+T F+ N MV
Sbjct: 242 FPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMV 301
Query: 537 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 358
DPRHG+Y+ L+RG V K+V+ I +++TK + FV+W P + PP
Sbjct: 302 AADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-- 359
Query: 357 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR- 181
DL + + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 ---DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAES 413
Query: 180 --EDLAALEKDYEEVGMD 133
DL + + Y+E G+D
Sbjct: 414 NMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 84.6 bits (200), Expect = 2e-17
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Frame = -2
Query: 741 SPRSLLLEFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS---AEKAYHEQLSVAEIT 571
S + L + G +N DL +L+P PR HF L +Y P + E + +V ++
Sbjct: 237 SASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVM 296
Query: 570 NACFEPANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 394
P NQMV +P + +++ + +G+ P DV+ ++ I+ +R F+ W P
Sbjct: 297 RRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASI 356
Query: 393 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 214
+V ++ + P + ++ + ML+N T+IA + R ++D + + AF+ Y E
Sbjct: 357 QVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKE 411
Query: 213 GMEE---GEFSEAREDLAALEKDYE 148
+ E EF +R+ +A L +YE
Sbjct: 412 AIFEDDLNEFDSSRDVVADLINEYE 436
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 32.3 bits (70), Expect = 0.094
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = -3
Query: 695 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPV 522
TS S L+ + +++ T S+ P PT+ S +P + T+ ++ + +TPV
Sbjct: 381 TSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Query: 521 MASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 366
++ CT TS P T + S P +N +T S TS P
Sbjct: 441 TSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 30.3 bits (65), Expect = 0.38
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = -3
Query: 686 SSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTW 507
S+ + + TPV++S++ T SS P T P + T+ ++ + +TPV ++
Sbjct: 499 STSVPYTSTPVTSSNY--TISSSTPVTST------PVTTTNCTTSTSVLYTSTPVTSTPL 550
Query: 506 LAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 372
CT TS P T P S ++ S++ PV+ + TTS
Sbjct: 551 ATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 28.3 bits (60), Expect = 1.5
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = -3
Query: 692 SPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 513
+P+ T TP++T++ T +S+P T + +P + T+ ++ + +TPV ++
Sbjct: 410 TPTVPPTSSSTPLTTTNC--TTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTST 466
Query: 512 TWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 372
CT TS P T + S P +N +T S TS
Sbjct: 467 PLTTTNCTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
Score = 26.2 bits (55), Expect = 6.1
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Frame = -3
Query: 773 YTNLIVSSDRXLLDHCFLNSTAL*MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMN 594
YT+ V+S +C ST++ ++P + TP++T++ T +S+P T
Sbjct: 435 YTSTPVTSTPLATTNC-TTSTSVPYTSTPVTS-----TPLTTTNC--TTSTSIPYTSTPV 486
Query: 593 SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSS 414
+ +P + T+ ++ + +TPV +S + T VTS P T + + SVL S+
Sbjct: 487 T-STPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPV--TTTNCTTSTSVLYTST 543
Query: 413 TGVQ-PVSRSVSTTS 372
P++ + TTS
Sbjct: 544 PVTSTPLATTNCTTS 558
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.22
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = -3
Query: 620 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 441
S+P+ P P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 440 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 354
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.50
Identities = 32/124 (25%), Positives = 57/124 (45%)
Frame = -3
Query: 782 APTYTNLIVSSDRXLLDHCFLNSTAL*MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRP 603
+PT ++ +SS +ST +S S T + STS + T SS RP
Sbjct: 335 SPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSST-VSSSSSTSSSTLTSSSSSSSRP 393
Query: 602 TMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLS 423
+S S +H SS ++ ++ PV ++ + + +S+ + SL SKP + +
Sbjct: 394 ASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKPILTA 452
Query: 422 NSST 411
+SS+
Sbjct: 453 SSSS 456
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.5 bits (63), Expect = 0.66
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Frame = -3
Query: 785 LAPTYTNLIVSSDRXLLDHCFLNSTAL*MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRR 606
L T ++ VSS +S++ TSPSS + + S+S S + SS
Sbjct: 123 LQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSS 182
Query: 605 PTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLA-VCCTVVTSYPRM*TRPSLPSKPSV 429
+ +S S S + +SS + ++ P+ +ST + + +S +RPS S
Sbjct: 183 SSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFIT 242
Query: 428 LSNSST-----GVQPVSRSVSTTSHPP 363
+SST V P S S ST+S P
Sbjct: 243 TMSSSTFISTVTVTPSSSSSSTSSEVP 269
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +1
Query: 448 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDW 627
S G +LGY ++ A++V+A + V HL+ G D + K G D
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459
Query: 628 RVRDQWEVDTGVR 666
R Q+E++ G++
Sbjct: 460 VDRVQYELEAGLQ 472
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 576 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 451
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 284 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 111
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 110 EPKSTK 93
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -3
Query: 689 PSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 543
P+++ P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.6 bits (56), Expect = 4.7
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -3
Query: 755 SSDRXLLDHCFLNSTAL*MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPR 576
SS L+ CF+ SPS LT L S++ S + + + R+ T +S SP+
Sbjct: 605 SSPNASLEQCFVQR-------SPSKMLT-TLRNNSSTFPSLRKNAMIARKSTADSLSSPK 656
Query: 575 SQTHASSP 552
Q+ S+P
Sbjct: 657 RQSVPSTP 664
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 626 QSSLPRRPTMNSFPSPRSQTHASSPPTR 543
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 452 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 366
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 471 WVRRHHGTAYSKPCTCHDGG 530
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 8.1
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -3
Query: 665 LTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 513
LTP + S +S + +S +R ++N+ PS + +H+SS T + PV+++
Sbjct: 130 LTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPPVLSN 178
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,256,235
Number of Sequences: 5004
Number of extensions: 70512
Number of successful extensions: 267
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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