Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O10
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0118 - 871481-872606,872795-872950,873051-873817 34 0.12
01_01_0103 - 773727-774737,774797-774813,774852-775078,777465-77... 33 0.28
01_04_0095 + 15979884-15980234 32 0.66
01_06_0310 - 28376378-28376607,28376789-28376897 31 0.87
01_01_0115 - 856957-858055,858479-858538,858802-859583 31 0.87
01_01_0099 - 751627-752126,752866-753056,753188-753945 31 1.1
01_01_0105 - 785373-786489,786844-787619 31 1.5
01_01_0097 - 741881-742977,743100-743320,743438-744156 31 1.5
11_01_0738 - 6218730-6220173,6221969-6223056 30 2.0
01_01_0116 - 861044-861405,861495-861633,862078-862501,862634-86... 30 2.0
08_02_0502 + 17844775-17845092,17845528-17845634,17846039-178464... 30 2.7
02_01_0182 + 1245577-1245670,1245928-1246017,1246258-1246290,124... 30 2.7
01_01_0112 - 838809-839748,839781-839908,840203-840274,840306-84... 30 2.7
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960... 29 3.5
05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281 29 4.6
07_01_1010 + 8561656-8561764,8563666-8563919,8564309-8564331,856... 28 8.1
04_04_1677 + 35306232-35306328,35306697-35307248,35307324-353076... 28 8.1
>01_01_0118 - 871481-872606,872795-872950,873051-873817
Length = 682
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 291 GHGGYSSEIRGEILPGRVVHRHVTGVTLFPSCTNDEYVLACVTRGRGRH 437
G GGY S +G +LPG +H + + + +C +E++ T GR H
Sbjct: 366 GQGGYGSVYKGVLLPGD-LHVAIKILNGYSNCNGEEFISEVATIGRIHH 413
>01_01_0103 -
773727-774737,774797-774813,774852-775078,777465-778237
Length = 675
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 282 YRPGHGGYSSEIRGEILPGRVVHRHVTGVTLFPSCTNDEYVLACVTRGRGRH 437
Y G GGY S +G LPG VH + + +C ++++ T GR H
Sbjct: 352 YSQGQGGYGSVYKGVFLPGD-VHVAIKMLDGNSNCNGEDFISEVATIGRIHH 402
>01_04_0095 + 15979884-15980234
Length = 116
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 342 PVPAGSPRESHCCTLRARDDNNSKRLASRQTCH-QLYEELSAGRGRAGPC 196
P P SP S CC R+R S L + H +L E + G AG C
Sbjct: 33 PCPGASPMASPCCRTRSRARTGSTSLGAVAHRHVELREGVGHGGDEAGAC 82
>01_06_0310 - 28376378-28376607,28376789-28376897
Length = 112
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -3
Query: 479 NLRSDASLSHGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYNPSRQDLPA 318
+L + A+ H AA P R+ ++ W E GY+ VY+ +L A
Sbjct: 6 SLLAAAAADDARHAQAAGPRRDDDHKAWLLRRAWHEAREGYVVVYDGGGNELSA 59
>01_01_0115 - 856957-858055,858479-858538,858802-859583
Length = 646
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 291 GHGGYSSEIRGEILPGRVVHRHVTGVTLFPS-CTNDEYVLACVTRGRGRH 437
G GGY S +G +LPG + HV L S C +E++ T GR H
Sbjct: 339 GQGGYGSVYKGVLLPG---NAHVAVKVLGNSNCNGEEFISEVSTIGRIHH 385
>01_01_0099 - 751627-752126,752866-753056,753188-753945
Length = 482
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 291 GHGGYSSEIRGEILPGRVVHRHVTGVTLFPSCTNDEYVLACVTRGRGRH 437
G GGY S +G +LPG VH V + + +C +E++ T GR H
Sbjct: 324 GQGGYGSVYKGVLLPGD-VHVAVKVLGNY-NCNGEEFISEVSTIGRIHH 370
>01_01_0105 - 785373-786489,786844-787619
Length = 630
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 285 RPGHGGYSSEIRGEILPGRVVHRHVTGVTLFPSCTNDEYVLACVTRGRGRH 437
R G G Y + +G +LPG +H V + +C +E++ T GR H
Sbjct: 315 RLGQGSYGTVYKGVLLPGN-IHVAVKMLNGNSNCNGEEFISEVSTIGRIHH 364
>01_01_0097 - 741881-742977,743100-743320,743438-744156
Length = 678
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 291 GHGGYSSEIRGEILPGRVVHRHVTGVTLFPSCTNDEYVLACVTRGRGRH 437
G GGY S +G ILPG VH + ++ + +C +E++ T G H
Sbjct: 375 GQGGYGSVFKGVILPGD-VHVAIKMLSNY-NCNGEEFISEVSTIGSIHH 421
>11_01_0738 - 6218730-6220173,6221969-6223056
Length = 843
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -1
Query: 385 QDGKRVTPVTWRCTTRPGRISPRISLLYPPCPGR*QFKTSRQPSNLSPT 239
+DGK V C P + I++LY CP R TS+ PSN + T
Sbjct: 312 RDGKHTAYVA--CLVAP--VVAYIAILYIACPSRSPSSTSKSPSNTNTT 356
>01_01_0116 -
861044-861405,861495-861633,862078-862501,862634-863131,
863217-863249,863490-863680,863828-864132,864196-864208
Length = 654
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 291 GHGGYSSEIRGEILPGRVVHRHVTGVTLFPSCTNDEYVLACVTRGRGRH 437
G GGY S +G +LPG +H V + +C +E++ T G H
Sbjct: 239 GQGGYGSVYKGVLLPGD-LHVAVKMLNGNSNCNGEEFISEVATIGMIHH 286
>08_02_0502 +
17844775-17845092,17845528-17845634,17846039-17846492,
17846623-17846694,17846804-17846925,17847079-17847294,
17847392-17847500,17847618-17847730,17847916-17848063,
17848274-17848396
Length = 593
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 231 LRIVGDKFDGWRDVLNCYRPGHGGYSSEIRGEILPGRVVHRHVTG 365
+ +VGD W+D + C G Y +EIR + G+ ++ + G
Sbjct: 470 VELVGDFTSNWKDKVKCDHKGGSRYEAEIR--LRHGKYYYKFIAG 512
>02_01_0182 +
1245577-1245670,1245928-1246017,1246258-1246290,
1246451-1246483,1246657-1246689,1246872-1246904,
1247073-1247105,1247237-1247286
Length = 132
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 457 NDASLRRFTRSKREVSFSSAESCFIFNKGAAGRSIAN 567
N SL+ SKR + F SA SC IF G +G + N
Sbjct: 34 NIFSLKYTPFSKRGLKFGSASSCPIFGSGRSGYNSVN 70
>01_01_0112 -
838809-839748,839781-839908,840203-840274,840306-840374,
840634-840698,840732-840907,841006-841757
Length = 733
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 291 GHGGYSSEIRGEILPGRVVHRHVTGVTLFPSCTNDEYVLACVTRGRGRH 437
G GGY S +G +LPG +H V + + SC +E++ T G H
Sbjct: 430 GQGGYGSVYKGVLLPGN-IHVAVKILANY-SCDGEEFINEVSTIGSIHH 476
>03_02_0579 -
9606317-9606892,9607571-9607799,9607902-9608011,
9608898-9609275,9609380-9609658,9610044-9610168,
9610269-9610335,9610582-9612006
Length = 1062
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 521 LSADENDTSLLDLVNLRSDASLSHGEH-HVAAAPARNASENVLI 393
LS DEN + + + +DAS++H EH +VA A+ VL+
Sbjct: 435 LSMDENLQMIAKIAAVCNDASIAHSEHQYVATGMPTEAALKVLV 478
>05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281
Length = 518
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = -1
Query: 433 RPRPRVTQARTYSSFVQDGKRVTPVTWRCTTRPGRISPRISLLYPP 296
+P+P+V Q + Y++ Q ++ V + ++ + +P ++LLYPP
Sbjct: 302 QPQPQVVQQQHYNNIQQVPAQI--VQMQTSSPQAQSAPHVTLLYPP 345
>07_01_1010 +
8561656-8561764,8563666-8563919,8564309-8564331,
8564926-8564962,8565503-8565985
Length = 301
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 452 HGEHHVAAAPARNASENVLIVCARWKEGHTGYMAVYNPSRQDLPAN 315
HG HVAAA +++ ++V R G G+ Y R P N
Sbjct: 24 HGARHVAAAIKGTGADSEMVVTERTAGGGGGHGRGYTSHRSHNPNN 69
>04_04_1677 +
35306232-35306328,35306697-35307248,35307324-35307608,
35308035-35308296,35308378-35308430,35308520-35308587,
35310331-35310420,35310502-35310586,35310822-35311254,
35312872-35313439,35313527-35314000
Length = 988
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 323 PANLTAVPSVPGTITIQNVSPAVKLVTNYTKNYQPAEDVLVPAKSTVVV 177
P+++T+ P+ +T +PA K T K++QP ++P V+
Sbjct: 218 PSSVTSTPASSPNVTTPVDAPAPKTKTVLQKHHQPYRITVIPGIGIAVI 266
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,997,857
Number of Sequences: 37544
Number of extensions: 383386
Number of successful extensions: 1189
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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