Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_O10
         (844 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.5  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   8.1  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 697 RPPSAAPVPVTEXANALAFRINKTLGSWPILQLTDTN 587
           R P+A+P P  + A+          GS  +LQ   +N
Sbjct: 739 RSPNASPSPAEQCASTTTITARSPQGSQGLLQCATSN 775


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 209 VLVPAKSTVVVSYVPIKHEKREKD 138
           +L+   ST VVS    KH +R +D
Sbjct: 13  LLLSIASTYVVSVAGYKHSRRHRD 36


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 770 DXVHXEGXWLPXGP 729
           D +H E  +LP GP
Sbjct: 4   DSIHWEARYLPAGP 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,609
Number of Sequences: 438
Number of extensions: 4073
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)