Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_O08
         (805 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064847-1|AAH64847.1|  770|Homo sapiens RNF17 protein protein.        32   2.8  
AL391560-3|CAI15248.2| 1623|Homo sapiens ring finger protein 17 ...    32   2.8  
AL354798-2|CAM23326.1| 1623|Homo sapiens ring finger protein 17 ...    32   2.8  
AL354798-1|CAI16633.1|  633|Homo sapiens ring finger protein 17 ...    32   2.8  
AK001907-1|BAA91972.1|  633|Homo sapiens protein ( Homo sapiens ...    32   2.8  

>BC064847-1|AAH64847.1|  770|Homo sapiens RNF17 protein protein.
          Length = 770

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 353 RLPTISNHVFFLNLAFY*ITICGFRPPVQSVGSTRVPRAP 472
           RL  I +H+         + + GF+PP++ +G TR+P  P
Sbjct: 675 RLCQIPSHLMRYPARAIKVLLAGFKPPLRDLGETRIPYCP 714


>AL391560-3|CAI15248.2| 1623|Homo sapiens ring finger protein 17
            protein.
          Length = 1623

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 353  RLPTISNHVFFLNLAFY*ITICGFRPPVQSVGSTRVPRAP 472
            RL  I +H+         + + GF+PP++ +G TR+P  P
Sbjct: 1528 RLCQIPSHLMRYPARAIKVLLAGFKPPLRDLGETRIPYCP 1567


>AL354798-2|CAM23326.1| 1623|Homo sapiens ring finger protein 17
            protein.
          Length = 1623

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 353  RLPTISNHVFFLNLAFY*ITICGFRPPVQSVGSTRVPRAP 472
            RL  I +H+         + + GF+PP++ +G TR+P  P
Sbjct: 1528 RLCQIPSHLMRYPARAIKVLLAGFKPPLRDLGETRIPYCP 1567


>AL354798-1|CAI16633.1|  633|Homo sapiens ring finger protein 17
           protein.
          Length = 633

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 353 RLPTISNHVFFLNLAFY*ITICGFRPPVQSVGSTRVPRAP 472
           RL  I +H+         + + GF+PP++ +G TR+P  P
Sbjct: 538 RLCQIPSHLMRYPARAIKVLLAGFKPPLRDLGETRIPYCP 577


>AK001907-1|BAA91972.1|  633|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11045 fis, clone PLACE1004460. ).
          Length = 633

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 353 RLPTISNHVFFLNLAFY*ITICGFRPPVQSVGSTRVPRAP 472
           RL  I +H+         + + GF+PP++ +G TR+P  P
Sbjct: 538 RLCQIPSHLMRYPARAIKVLLAGFKPPLRDLGETRIPYCP 577


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,513,227
Number of Sequences: 237096
Number of extensions: 1970930
Number of successful extensions: 3041
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3041
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)