Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O07
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 60 3e-10
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 53 4e-08
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 48 2e-06
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 48 2e-06
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 47 4e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 47 4e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 45 1e-05
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 43 4e-05
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 42 8e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 41 2e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 38 0.002
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 34 0.026
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 27 2.3
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 27 2.3
SPBC25H2.08c |mrs2||magnesium ion transporter Mrs2|Schizosacchar... 27 3.0
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 27 4.0
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 27 4.0
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 26 7.0
SPAC3G9.04 |ssu72||phosphoric ester hydrolase |Schizosaccharomyc... 26 7.0
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 25 9.3
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = -2
Query: 696 CDKXXFTKFALRKHMXSHTGERAFQCKVCXKAFGRRSTLTEHLRIHNNDRRFKCERCGQA 517
C+K + L+ HM +HT R FQC +C K+F R+ H ++H + F C C Q
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 516 FVQKCSWRGHMRNKHG 469
F + + H +++ G
Sbjct: 637 FARMDALNRHYKSEVG 652
Score = 42.3 bits (95), Expect = 8e-05
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 717 RPHXCEQCDKXXFTKFALRKHMXSHTGERAFQCKVCXKAFGRRSTLTEHLR 565
RP C C K + R+H HTG +AF C C + F R L H +
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 612 CXKAFGRRSTLTEHLRIHNNDRRFKCERCGQAFVQKCSWRGHMRNKHGV 466
C K F R L H+ H N R F+C C ++F ++ R H + G+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGI 625
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 53.2 bits (122), Expect = 4e-08
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -2
Query: 744 SFEAGSXHDRPHXC--EQCDKXXFTKFALRKHMXSHTGERAFQCKVCXKAFGRRSTLTEH 571
S G D + C C+K K+ + H+ +H +R ++C +C F R L H
Sbjct: 432 SLYCGPEADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRH 491
Query: 570 LRIHNNDRRFKCE 532
LRIH N R + CE
Sbjct: 492 LRIHENGRPYVCE 504
Score = 37.1 bits (82), Expect = 0.003
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -2
Query: 612 CXKAFGRRSTLTEHLRIHNNDRRFKCERCGQAFVQKCSWRGHMR 481
C K R+ + H++ H +DR ++C+ C FV+ + H+R
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLR 493
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -2
Query: 717 RPHXCEQCDKXXFTKFALRKHMXSHTGERAFQCKV--CXKAFGRRSTLTEHLRIHNN 553
RP+ C C K + +H+ +HTGE+ C C K F R LT H RIH N
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 33.5 bits (73), Expect = 0.035
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 633 RAFQCKVCXKAFGRRSTLTEHLRIHNNDRRFKC--ERCGQAFVQKCSWRGHMR 481
R ++C +C KAF R T H+R H ++ C C + F + H R
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 47.6 bits (108), Expect = 2e-06
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -2
Query: 702 EQCDKXXFTKFALRKHMXSHTGERAFQCKV--CXKAFGRRSTLTEHLRIHNNDRRFKCER 529
E+C K L +H+ +H+ ER F C C KAF R+S L H R H N + F C
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 528 CG 523
G
Sbjct: 88 DG 89
Score = 43.2 bits (97), Expect = 4e-05
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = -2
Query: 642 TGERAFQC--KVCXKAFGRRSTLTEHLRIHNNDRRFKCE--RCGQAFVQKCSWRGHMR 481
+ ++ F C + C K + R S L +HLR H+N+R F C+ C +AF +K + H R
Sbjct: 18 SAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKR 75
Score = 40.7 bits (91), Expect = 2e-04
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = -2
Query: 705 CEQCDKXXFTKFALRKHMXSHTG----ERAFQCKV--CXKAFGRRSTLTEHLR-IHNNDR 547
C C + T LR H+ H + + C + C K+F R S L +H+ IH +
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 546 RFKCERCGQAFVQKCSWRGHM 484
F C+ CG F K + H+
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHL 286
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 702 EQCDKXXFTKFALRKHMXS-HTGERAFQCKVCXKAFGRRSTLTEHLRIHNNDRRFKCERC 526
E C K AL+KH+ H G AF C C FG + L HL R C++
Sbjct: 241 EGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHL------ERGTCKKA 294
Query: 525 GQAFVQKC 502
+ ++ +C
Sbjct: 295 HKPYINEC 302
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.8 bits (106), Expect = 4e-06
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -2
Query: 705 CEQCDKXXFTKFALRKHMXS-HTGERAFQCKVCXKAFGRRSTLTEHLRIH-NNDRRFKC 535
C +C K LR+H+ S HT E+ F C +C K F RR L +H R+H N R C
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLAC 482
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 639 GERAFQCKVCXKAFGRRSTLTEHLR-IHNNDRRFKCERCGQAFVQKCSWRGHMR 481
G ++F C C K F R L H+R +H +++ F C CG+ F ++ + R H R
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHER 471
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 46.8 bits (106), Expect = 4e-06
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -2
Query: 681 FTKFALRKHMXSHT-GERAFQCKV--CXKAFGRRSTLTEHLRIHNNDRRFKCERCGQAFV 511
FT+ L+K +H G+ F C C K+F R+ L H R H N + F C C +AF
Sbjct: 7 FTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFA 66
Query: 510 QKCSWRGHMRNKH 472
+ H++ H
Sbjct: 67 RSDVLNRHVQQMH 79
Score = 39.5 bits (88), Expect = 5e-04
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 696 CDKXXFTKFALRKHMXSHTGERAFQCKVCXKAFGRRSTLTEHLR 565
C K K LR+H +H +AF C C +AF R L H++
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 711 HXCEQCDKXXFTKFALRKHMXSHTGERAFQCKV--CXKAFGRRSTLTEHLRIH 559
+ C +C + +L+ H SHTGER F C C KAF RS + H RIH
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 40.7 bits (91), Expect = 2e-04
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Frame = -2
Query: 663 RKHMXSHTGERA--------FQCKVCXKAFGRRSTLTEHLRIHNNDRRFKCE--RCGQAF 514
RK SHTG + ++C C + F R S+L H H +R F C+ CG+AF
Sbjct: 448 RKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAF 507
Query: 513 VQKCSWRGHMRNKHGV 466
+ + R H R HG+
Sbjct: 508 NVRSNMRRHQR-IHGL 522
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 43.2 bits (97), Expect = 4e-05
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = -2
Query: 678 TKFALRKHMXSHTGERAFQCKV--CXKAFGRRSTLTEHLR-IHNND 550
++FAL H+ SHTGE+ F C V C ++F R L +H+R +H D
Sbjct: 89 SRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -2
Query: 591 RSTLTEHLRIHNNDRRFKCE--RCGQAFVQKCSWRGHMRNKHGVD 463
R L HLR H ++ F C C ++F + + HMR H D
Sbjct: 90 RFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 42.3 bits (95), Expect = 8e-05
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 717 RPHXCEQCDKXXFTKFALRKHMXSHTGERAFQCKV--CXKAFGRRSTLTEHLRIH 559
+ + C C + + +H+ SHTGE+ F+C C K F RR L H+R H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 34.7 bits (76), Expect = 0.015
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 633 RAFQCKVCXKAFGRRSTLTEHLRIHNNDRRFKCE--RCGQAFVQKCSWRGHMR 481
++++C C + F R+ H+R H ++ F+C C + F ++ H+R
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR 54
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 663 RKHMXSHTGERAFQCKV--CXKAFGRRSTLTEHLRIHNNDRRFKCERCGQAFVQKCSWRG 490
+K G+ ++C C K+F R+ H R H N + F C C +F +
Sbjct: 5 KKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNR 64
Query: 489 HMRNKH 472
H+ KH
Sbjct: 65 HVNQKH 70
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2
Query: 696 CDKXXFTKFALRKHMXSHTGERAFQCKVCXKAFGRRSTLTEHL 568
C K K R+H SHT +AF C C +F R L H+
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Frame = -2
Query: 717 RPHXCEQCDKXXFTKFALRKHMXSHTGERAFQCKV-------CXKAFGRRSTLTEH-LRI 562
+ + CE C + L++H+ SHT E+ F C C + F RR L H +I
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 561 HNN 553
H N
Sbjct: 128 HRN 130
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Frame = -2
Query: 633 RAFQCKVCXKAFGRRSTLTEHLRIHNNDRRFKCER-------CGQAFVQKCSWRGHMRNK 475
+ + C+ C +AF R L H+R H N++ F C CG+ F ++ H +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 474 H 472
H
Sbjct: 128 H 128
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 33.9 bits (74), Expect = 0.026
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -2
Query: 636 ERAFQCKVCXKAFGRRSTLTEHLRIHNNDRRFKCERCGQAFVQKCSWRGHMRNKH 472
+R F C C K F R LT H H+ C C +K + H++ H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 32.3 bits (70), Expect = 0.081
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = -2
Query: 717 RPHXCEQCDKXXFTKFALRKHMXSHTGERAFQCKVCXKAFGRRSTLTEHLRIHNNDR 547
R C+QC K L +H H+ C C R+ L H++ +ND+
Sbjct: 29 RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 435 LWAEL*LEGSHEKQSGDGRTIHMSSVRLWAEV*LEGSHE 319
LW +L + + + Q GD I+ ++ LW E LE H+
Sbjct: 273 LWNKLQVSPNEQSQFGDSSNINQENISLW-ETELEKLHQ 310
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 27.5 bits (58), Expect = 2.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 543 FKCERCGQAFVQKCSWRGHMRNKHGVD 463
F+C++C FV++ H R H V+
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYHQVE 165
>SPBC25H2.08c |mrs2||magnesium ion transporter
Mrs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +3
Query: 159 RVIFPSALLHKPDIKHIYCTSIPCLFFM*PFQLHFCPKS 275
R+I P LL KP KH Y T L P CP S
Sbjct: 32 RIIRPVVLLEKPFDKHFYATDSNPLITGFPETSKNCPPS 70
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 305 PLLCSSCDPSNYTSAQSLTLDICIVRPSPDCFS 403
P+LC C S S L D C PDC +
Sbjct: 406 PILCFRCHKSALVSQSILACDYCNSYWHPDCLN 438
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 567 RIHNNDRRFKCERCGQAFVQKCSWRGHM 484
R+ DR+FKC+ CG+ GH+
Sbjct: 59 RLGTIDRQFKCQTCGETMADCPGHFGHI 86
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 630 AFQCKVCXKAFGRRSTLTEHLRIHNNDRRFK 538
AF C+VC K FG+ + H + +++ K
Sbjct: 242 AFYCEVCQKFFGKITVFEAHKKSKAHNKAVK 272
>SPAC3G9.04 |ssu72||phosphoric ester hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 197
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 526 RPGFCAEVQLEGSHEEQTRGGRAI 455
RP + V ++ +HEE + GG+AI
Sbjct: 133 RPVYLINVDIKDNHEEASVGGKAI 156
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 77 SCDPSNYTCAQSLTLNTFIALPFHFCSSCDLSKCTSAQ 190
S DP +C + + ++ ++ S C++SKCT+ +
Sbjct: 201 STDPIPSSCIHKIITVDYFSI--YWISKCEISKCTTTE 236
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,114,757
Number of Sequences: 5004
Number of extensions: 64552
Number of successful extensions: 185
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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