Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O03
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 75 6e-14
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 71 1e-12
U13076-1|AAA96984.1| 463|Caenorhabditis elegans steroid hormone... 31 0.98
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 31 1.3
Z81473-8|CAB03899.2| 418|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL031636-1|CAA21046.2| 418|Caenorhabditis elegans Hypothetical ... 30 2.3
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 29 3.0
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z36237-1|CAA85271.2| 619|Caenorhabditis elegans Hypothetical pr... 29 3.0
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 29 3.0
AY204167-1|AAO39171.1| 619|Caenorhabditis elegans nuclear recep... 29 3.0
AF273770-1|AAG15119.1| 469|Caenorhabditis elegans nuclear recep... 29 3.0
AF083224-1|AAD03682.1| 619|Caenorhabditis elegans nuclear recep... 29 3.0
Z50110-4|CAA90443.2| 203|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 28 9.1
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 74.9 bits (176), Expect = 6e-14
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = -2
Query: 388 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLH-DSFVCAGGQEGR-DTCQGDGGAPLACPIG 215
L++I + ++ C+SL +G R+H S +CAG G+ D+CQGD G PL C
Sbjct: 196 LREIHVPLLSTLFCSSL--PNYIG---RIHLPSMLCAGYSYGKIDSCQGDSGGPLMCA-R 249
Query: 214 DSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKMN 95
D ++L G+V+WGIGC + +P VY NV +W++ +MN
Sbjct: 250 DGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWINLEMN 289
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = -2
Query: 295 SFVCAGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMR 119
S CAG EG D+CQGD G P AC D + LAG+++WG GC QK P +Y VA
Sbjct: 194 SAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYL 253
Query: 118 SWVDRKMN 95
SW+ +N
Sbjct: 254 SWISAIIN 261
>U13076-1|AAA96984.1| 463|Caenorhabditis elegans steroid hormone
receptor familymember CNR8 protein.
Length = 463
Score = 31.1 bits (67), Expect = 0.98
Identities = 20/65 (30%), Positives = 25/65 (38%)
Frame = +3
Query: 87 PHAFIFRSTQDLMRATLA*TAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 266
PH F + D M L T + F P P + S + G PSP SL
Sbjct: 13 PHYNPFALSNDFMPNPLMPTFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 72
Query: 267 PSCPP 281
P+ PP
Sbjct: 73 PTSPP 77
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 298 DSFVCAGGQEGRDTCQGDGGAPLACPIGDS-RYKLAGLVAWGIGCGQ 161
DSF C +E ++ C GD G L DS R + +V++G C Q
Sbjct: 257 DSF-CTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYGSDCVQ 302
>Z81473-8|CAB03899.2| 418|Caenorhabditis elegans Hypothetical
protein Y47H9A.1 protein.
Length = 418
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 508 LGEVEGRVHPQERHVVLXAFRVEIFVYDYFLERVSLGGSS 627
+ + E R HP ++ V L F++ +FL GGSS
Sbjct: 18 ISQAEARSHPSKKIVALVLVGTLFFLFSFFLAVALFGGSS 57
>Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical
protein C17D12.3 protein.
Length = 463
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 508 LGEVEGRVHPQERHVVLXAFRVEIFVYDYFLERVSLGGSS 627
+ + E R HP ++ V L F++ +FL GGSS
Sbjct: 18 ISQAEARSHPSKKIVALVLVGTLFFLFSFFLAVALFGGSS 57
>AL031636-1|CAA21046.2| 418|Caenorhabditis elegans Hypothetical
protein Y47H9A.1 protein.
Length = 418
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 508 LGEVEGRVHPQERHVVLXAFRVEIFVYDYFLERVSLGGSS 627
+ + E R HP ++ V L F++ +FL GGSS
Sbjct: 18 ISQAEARSHPSKKIVALVLVGTLFFLFSFFLAVALFGGSS 57
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 126 RATLA*TAGTSFCPHPMPQATSPANL*-RLSPMGQARGA-PPSPWQVSLPSCPPAHTKLS 299
RA A P P+P AT P+ ++P+ A PP+P Q S P PP + S
Sbjct: 222 RAKAASAVAPEANPAPVPTATKPSPFAPAIAPLRDGAPAQPPAPIQASAPLRPPVAKQNS 281
Query: 300 CRR 308
++
Sbjct: 282 LQK 284
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 126 RATLA*TAGTSFCPHPMPQATSPANL*-RLSPMGQARGA-PPSPWQVSLPSCPPAHTKLS 299
RA A P P+P AT P+ ++P+ A PP+P Q S P PP + S
Sbjct: 222 RAKAASAVAPEANPAPVPTATKPSPFAPAIAPLRDGAPAQPPAPIQASAPLRPPVAKQNS 281
Query: 300 CRR 308
++
Sbjct: 282 LQK 284
>Z36237-1|CAA85271.2| 619|Caenorhabditis elegans Hypothetical
protein C48D5.1 protein.
Length = 619
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +3
Query: 87 PHAFIFRSTQDLMRATLA*TAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 266
PH F + D M L + + F P P + S + G PSP SL
Sbjct: 169 PHYNPFALSNDFMPNPLMPSFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 228
Query: 267 PSCPP 281
P+ PP
Sbjct: 229 PTSPP 233
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Frame = -2
Query: 289 VCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIG-----CGQKDVPAVYANVAR 125
+CAG T GD G PL + Y G+ ++G Q P VY +++
Sbjct: 215 ICAGAYL-HGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISK 273
Query: 124 MRSWV 110
W+
Sbjct: 274 YVPWI 278
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 606 SFEEIIIHEDFNAKSXKNDVALLRMHAPFNLAEHINMICL 487
S +E IH +N ++ ND+ALLR+ + + I +CL
Sbjct: 106 SVKEAYIHSGYNNQTADNDIALLRISSDLSKL-GIKPVCL 144
>AY204167-1|AAO39171.1| 619|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 619
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +3
Query: 87 PHAFIFRSTQDLMRATLA*TAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 266
PH F + D M L + + F P P + S + G PSP SL
Sbjct: 169 PHYNPFALSNDFMPNPLMPSFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 228
Query: 267 PSCPP 281
P+ PP
Sbjct: 229 PTSPP 233
>AF273770-1|AAG15119.1| 469|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 469
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +3
Query: 87 PHAFIFRSTQDLMRATLA*TAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 266
PH F + D M L + + F P P + S + G PSP SL
Sbjct: 19 PHYNPFALSNDFMPNPLMPSFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 78
Query: 267 PSCPP 281
P+ PP
Sbjct: 79 PTSPP 83
>AF083224-1|AAD03682.1| 619|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 619
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +3
Query: 87 PHAFIFRSTQDLMRATLA*TAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVSL 266
PH F + D M L + + F P P + S + G PSP SL
Sbjct: 169 PHYNPFALSNDFMPNPLMPSFTSPFYPQHFPVSDSRRGSQGTTSSSNNTGGTPSPHSSSL 228
Query: 267 PSCPP 281
P+ PP
Sbjct: 229 PTSPP 233
>Z50110-4|CAA90443.2| 203|Caenorhabditis elegans Hypothetical
protein F18H3.1 protein.
Length = 203
Score = 28.3 bits (60), Expect = 6.9
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = -2
Query: 370 DMVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAG 191
D PR N++ Q T R+ + V +EG C G GGA PI ++
Sbjct: 24 DNASYPRFNAVYQPTVRLDVGRMGKNVVIL--KEGERIC-GIGGAIATVPIVQNKAYFQV 80
Query: 190 LV----AWGIGCGQKDVP 149
V WGIG GQK P
Sbjct: 81 TVQQTGTWGIGLGQKQSP 98
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
protein T28F3.5 protein.
Length = 1679
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 356 PSLQFAAAANQTWDQVPSARQFRVRRGTGGQG 261
P+LQ+ A + +P ++FR R TG G
Sbjct: 367 PALQYQIAMGRKLKDIPCIKRFREREATGNAG 398
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,599,703
Number of Sequences: 27780
Number of extensions: 427068
Number of successful extensions: 1437
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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