Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_O02
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 112 3e-25
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 111 4e-25
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 111 4e-25
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 111 4e-25
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 111 4e-25
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 111 4e-25
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 111 4e-25
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 111 4e-25
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 111 4e-25
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 111 4e-25
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 110 1e-24
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 75 4e-14
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 60 2e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 45 7e-05
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 30 1.7
AF016675-3|AAB66138.2| 396|Caenorhabditis elegans Hypothetical ... 29 3.9
Z77663-1|CAB01210.1| 94|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.9
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.9
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 112 bits (269), Expect = 3e-25
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 293 LYANTVLSGGTSMFPGIADRMQKEIQHLAPSTM-KIKIIAPPERKYSVWIGGSILASLST 351
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 111 bits (268), Expect = 4e-25
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGSILASLST 352
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 111 bits (268), Expect = 4e-25
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGSILASLST 352
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 111 bits (268), Expect = 4e-25
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGSILASLST 352
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 111 bits (268), Expect = 4e-25
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGSILASLST 352
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 111 bits (268), Expect = 4e-25
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGSILASLST 352
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 111 bits (268), Expect = 4e-25
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGSILASLST 352
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 111 bits (268), Expect = 4e-25
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 250 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGSILASLST 308
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 309 FQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 111 bits (268), Expect = 4e-25
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 280 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGSILASLST 338
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 339 FQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 111 bits (268), Expect = 4e-25
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGSILASLST 352
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 110 bits (265), Expect = 1e-24
Identities = 56/84 (66%), Positives = 63/84 (75%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LYANTV S GT P + K + L+P +++ + PERKYSVWIGGSILASLST
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPTM--KIKIIAPPERKYSVWIGGSILASLST 351
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = -3
Query: 421 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 299
ERKY WIGGSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 395 ERKYGAWIGGSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = -3
Query: 547 LYANTVFSRGTHHVPWNRRPVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSILASLST 368
LY+N V S GT + +++P ++R ER WIGGSI+ASL T
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAP-ADGKIRISASQERNSLTWIGGSIVASLDT 350
Query: 367 FQQMWISKQEYDESGPSIVHRKCF 296
F++MW+ K+EY++ G S +H++ F
Sbjct: 351 FRKMWLGKKEYEDMGASAMHKRFF 374
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -3
Query: 418 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 314
++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 380 QRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = -3
Query: 424 PERKYSVWIGGSILASL--STFQQMWISKQEYDESG 323
P RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 348 PSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = -1
Query: 543 TPTPYFPXVPTMYPGIADPYAKGNHSSRPIDNED*DHCSSQRGSTPYGSVDRSSPPSLPS 364
TPTPY P+ P + PY G+ ++ + + G PY +V +S+P + +
Sbjct: 167 TPTPY----PSSQPTMPTPYPTGSGAAPYPPSSTPYPSAGAMGYNPYMNVPQSTPYPMGA 222
Query: 363 NKCGSRNKSTTSLAPP 316
+ ++++ APP
Sbjct: 223 SGASPYPSASSNPAPP 238
>AF016675-3|AAB66138.2| 396|Caenorhabditis elegans Hypothetical
protein T27B7.6 protein.
Length = 396
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 478 FCIRVGDSRVHGGYXGKIRCWRTSXF 555
FC R+ D R HG + G I C + F
Sbjct: 11 FCCRICDQRAHGNHFGVISCRACAAF 36
>Z77663-1|CAB01210.1| 94|Caenorhabditis elegans Hypothetical
protein F53F4.1 protein.
Length = 94
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/62 (27%), Positives = 22/62 (35%)
Frame = +2
Query: 473 FPFAYGSAIPGYMVGTXGKYGVGVQVXSGFPXXXS*XXLYXGLXGCXKLPYPKXXGWKKT 652
+P YG GY G G YG G+ + +G GL G + P W
Sbjct: 25 YPGMYGGGYGGYGYGGYGGYGTGLGMYNGLGYGLGGVGGLGGLGGGYGMYSPYTNYWCNN 84
Query: 653 LG 658
G
Sbjct: 85 YG 86
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 237 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 329
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 340 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 239
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 237 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 329
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 421 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 260
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,335,069
Number of Sequences: 27780
Number of extensions: 280093
Number of successful extensions: 869
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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