Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_N24
(1007 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 28 9.2
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 28 9.2
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 28 9.2
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 28 9.2
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 28 9.2
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 28 9.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 4.0
Identities = 25/88 (28%), Positives = 25/88 (28%), Gaps = 3/88 (3%)
Frame = -3
Query: 882 PXPPGXKKXXXNPXXXXXXG---PXXXXP*PPFLKXXFGGXPXXXGPXLXRPXNPXGXXA 712
P PPG P G P P PP GG P G P P G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPP---PPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 711 XVPLTPXXXXXXGPXXXVPPVXRXPXXP 628
P P GP PP P P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -2
Query: 982 GXXPXXXXXXPXPXPXWGXXXPXTPLKGXXXPXPLXPGGEKXXPKPP 842
G P P P P G P+ G P P PGG P PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLP----PISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 4.0
Identities = 25/88 (28%), Positives = 25/88 (28%), Gaps = 3/88 (3%)
Frame = -3
Query: 882 PXPPGXKKXXXNPXXXXXXG---PXXXXP*PPFLKXXFGGXPXXXGPXLXRPXNPXGXXA 712
P PPG P G P P PP GG P G P P G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPP---PPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 711 XVPLTPXXXXXXGPXXXVPPVXRXPXXP 628
P P GP PP P P
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -2
Query: 982 GXXPXXXXXXPXPXPXWGXXXPXTPLKGXXXPXPLXPGGEKXXPKPP 842
G P P P P G P+ G P P PGG P PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLP----PISGGPPPPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 4.0
Identities = 25/88 (28%), Positives = 25/88 (28%), Gaps = 3/88 (3%)
Frame = -3
Query: 882 PXPPGXKKXXXNPXXXXXXG---PXXXXP*PPFLKXXFGGXPXXXGPXLXRPXNPXGXXA 712
P PPG P G P P PP GG P G P P G
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPP---PPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 711 XVPLTPXXXXXXGPXXXVPPVXRXPXXP 628
P P GP PP P P
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -2
Query: 982 GXXPXXXXXXPXPXPXWGXXXPXTPLKGXXXPXPLXPGGEKXXPKPP 842
G P P P P G P+ G P P PGG P PP
Sbjct: 316 GGLPPITGGPPPPPPPGGLP----PISGGPPPPPPPPGGCPPPPPPP 358
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -1
Query: 974 PXXXGXXPXPXPXLGXXXXPNPXKGXXXPPP 882
P G P P P +G P P G PPP
Sbjct: 88 PMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -2
Query: 973 PXXXXXXPXPXPXW-GXXXPXTPLKGXXXPXPLXPGGEKXXPKPPXXXXXXPXXXXPXTP 797
P P P P + G P P+ G P P G P PP P P TP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP-PMFGAPPPPPPPSGLGVAPQPPRPKTP 135
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -3
Query: 753 PXLXRPXNPXGXXAXVPLTPXXXXXXGPXXXVPPVXRXPXXP*PPVPMFP 604
P +P + +PL P GP PV + P P PP P+ P
Sbjct: 1066 PFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAP--PPPPRPVIP 1113
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -3
Query: 753 PXLXRPXNPXGXXAXVPLTPXXXXXXGPXXXVPPVXRXPXXP*PPVPMFP 604
P +P + +PL P GP PV + P P PP P+ P
Sbjct: 1060 PFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAP--PPPPRPVIP 1107
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -3
Query: 753 PXLXRPXNPXGXXAXVPLTPXXXXXXGPXXXVPPVXRXPXXP*PPVPMFP 604
P +P + +PL P GP PV + P P PP P+ P
Sbjct: 1066 PFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAP--PPPPRPVIP 1113
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -3
Query: 753 PXLXRPXNPXGXXAXVPLTPXXXXXXGPXXXVPPVXRXPXXP*PPVPMFP 604
P +P + +PL P GP PV + P P PP P+ P
Sbjct: 1060 PFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAP--PPPPRPVIP 1107
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -3
Query: 753 PXLXRPXNPXGXXAXVPLTPXXXXXXGPXXXVPPVXRXPXXP*PPVPMFP 604
P +P + +PL P GP PV + P P PP P+ P
Sbjct: 1060 PFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAP--PPPPRPVIP 1107
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -3
Query: 753 PXLXRPXNPXGXXAXVPLTPXXXXXXGPXXXVPPVXRXPXXP*PPVPMFP 604
P +P + +PL P GP PV + P P PP P+ P
Sbjct: 1066 PFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAP--PPPPRPVIP 1113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,232,796
Number of Sequences: 27780
Number of extensions: 229116
Number of successful extensions: 432
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2646946214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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