Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_N20
         (828 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0144 - 1316626-1316658,1317580-1318863                           29   6.0  
01_01_0119 + 1102872-1104170,1105419-1105516,1105849-1106206           29   6.0  
04_04_0442 - 25229186-25229568,25229740-25232671                       28   7.9  
01_01_0743 - 5763654-5766902                                           28   7.9  

>01_01_0144 - 1316626-1316658,1317580-1318863
          Length = 438

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 603 PLPGSMLGPTFACIIATQFSYSRRGDRFWFEL 508
           PLP  + GPT+   I T FS++  G  FW +L
Sbjct: 198 PLPPHLCGPTYFFHIDTAFSFA--GTIFWVDL 227


>01_01_0119 + 1102872-1104170,1105419-1105516,1105849-1106206
          Length = 584

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 603 PLPGSMLGPTFACIIATQFSYSRRGDRFWFEL 508
           PLP  + GPT+   I T FS++  G  FW +L
Sbjct: 204 PLPPHLCGPTYFFHIDTAFSFA--GTIFWVDL 233


>04_04_0442 - 25229186-25229568,25229740-25232671
          Length = 1104

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 455 AFLISASCSGVNDEGW 502
           AFL++ +C G+N EGW
Sbjct: 20  AFLLATTCHGLNHEGW 35


>01_01_0743 - 5763654-5766902
          Length = 1082

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
 Frame = +2

Query: 455 AFLISASCSGVNDEGW-FGSSNQN---LSPRLEYENCVAIMQANVG 580
           A L + S SG+ DEGW F ++ +N   + P+L++  C+  +  + G
Sbjct: 816 AILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTG 861


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,460,095
Number of Sequences: 37544
Number of extensions: 407656
Number of successful extensions: 921
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)