Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_N18
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300...    34   0.17 
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279...    30   2.0  
02_05_0170 - 26431937-26434282                                         28   8.3  

>06_03_0742 + 24027506-24027721,24028835-24029004,24029893-24030052,
            24030162-24030455,24031490-24031717,24031827-24032006,
            24032079-24032238,24032591-24032617,24033426-24033613,
            24034269-24034532,24035123-24035218,24035311-24035399,
            24035473-24035620,24035842-24036051,24036141-24036440,
            24037906-24038248,24038747-24038952,24039071-24039273,
            24040021-24040117,24040148-24040222,24040328-24040602,
            24041116-24041256,24041469-24042339,24042481-24042520,
            24042605-24043050
          Length = 1808

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2

Query: 552  ENDPDRSAEQEYXDGXXVYRSEGDDIADGEEGYSSSAVSEEEVKYDP 412
            EN+ D  A+ E      +   E DD A+ EEG+   + SEE+ K  P
Sbjct: 1510 ENEDDLGADAEKWKRQEIDEMEYDDDAEKEEGFDMDSESEEDTKSKP 1556


>03_05_0640 -
           26326832-26327166,26327295-26327529,26327665-26327908,
           26328389-26328507,26328860-26329050,26329133-26329220,
           26331653-26331715,26331816-26333944,26334084-26334186
          Length = 1168

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 23/60 (38%), Positives = 29/60 (48%)
 Frame = -2

Query: 492 SEGDDIADGEEGYSSSAVSEEEVKYDPSVWQSVIRYGPEDKEIHPAVRGTASAVVTVRTA 313
           SEGD  ADGEE    S  ++  +K +  +W S +     DK   PA  G A A V V  A
Sbjct: 571 SEGDRAADGEE----SPEADHGMKSELGMWPSYL-----DKISKPAAAGAALAAVIVPAA 621


>02_05_0170 - 26431937-26434282
          Length = 781

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 495 RSEGDDIADGEEGYSSSAVS-EEEVKYDPSVWQSVIRYGPEDKE 367
           + +  D+ DG        ++ +EE+KYDP + + +  Y P  +E
Sbjct: 8   KRKAQDMIDGNGTSCPEEINWDEEIKYDPGLRKEIDAYHPNHRE 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,093,795
Number of Sequences: 37544
Number of extensions: 201887
Number of successful extensions: 610
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)