Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_N18
         (856 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr...    32   0.45 
AF067613-9|AAN73863.2|  326|Caenorhabditis elegans Serpentine re...    29   3.2  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    29   4.2  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    29   4.2  

>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
           protein C32E12.4 protein.
          Length = 1553

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = -2

Query: 546 DPDRSAEQEYXDGXXVYRSEGDDIADGEEGYSSSAVSEEEVKYDPSVWQSVIRYGPEDKE 367
           D D + E EY D       E D+  D EE +      E+E +Y+    + +  YG E++E
Sbjct: 811 DSDETDESEYYDDEEEIEDESDEYED-EEYWDEEIEYEDEEEYEYEDEEVLEEYGDEEEE 869


>AF067613-9|AAN73863.2|  326|Caenorhabditis elegans Serpentine
           receptor, class z protein20 protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +1

Query: 364 YLLIFWS--VSDDRLPHRRIVFHFFLADRTGGVAFFTVCNVISFT----TIHXXTIXVLL 525
           Y+ +F +  V D  +P    V HF+   R   + F  +C VI F     T+   ++ +L 
Sbjct: 44  YVYVFKANRVLDKEIPIFPFVNHFYSVIRMVQIIFLCMCTVIIFIILAYTLRSTSLVILT 103

Query: 526 LCAAVWIILN 555
           L   ++++L+
Sbjct: 104 LAVMIFVVLS 113


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
            protein.
          Length = 1829

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -2

Query: 528  EQEYXDGXXV--YRSEGDDIADGEEGYSSSAVSEEEVKYDPSVWQSVIRYGPE-DKEI 364
            + EY     V  Y+++  +  + EE   +  + E+E + DP  W+ ++++  E D+EI
Sbjct: 1158 QNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKLLKHHYEQDREI 1215


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -2

Query: 528  EQEYXDGXXV--YRSEGDDIADGEEGYSSSAVSEEEVKYDPSVWQSVIRYGPE-DKEI 364
            + EY     V  Y+++  +  + EE   +  + E+E + DP  W+ ++++  E D+EI
Sbjct: 1158 QNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKLLKHHYEQDREI 1215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,328,580
Number of Sequences: 27780
Number of extensions: 149060
Number of successful extensions: 382
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)