Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_N15
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 179 3e-45
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 179 3e-45
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 179 3e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 179 3e-45
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 179 3e-45
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 179 3e-45
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 178 4e-45
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 178 4e-45
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 178 4e-45
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 178 4e-45
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 166 2e-41
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 96 3e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 88 8e-18
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 84 1e-16
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 55 7e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 53 2e-07
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.43
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.75
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.75
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.75
Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical p... 28 7.0
Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 9.2
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 9.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 9.2
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 9.2
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 28 9.2
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 179 bits (435), Expect = 3e-45
Identities = 82/93 (88%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 179 bits (435), Expect = 3e-45
Identities = 82/93 (88%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 179 bits (435), Expect = 3e-45
Identities = 82/93 (88%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 179 bits (435), Expect = 3e-45
Identities = 82/93 (88%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 172 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 231
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 232 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 264
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 265 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 324
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 325 SIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 179 bits (435), Expect = 3e-45
Identities = 82/93 (88%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 202 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 261
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 262 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 294
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 295 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 354
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 355 SIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 179 bits (435), Expect = 3e-45
Identities = 82/93 (88%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 178 bits (433), Expect = 4e-45
Identities = 81/93 (87%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 178 bits (433), Expect = 4e-45
Identities = 81/93 (87%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 178 bits (433), Expect = 4e-45
Identities = 81/93 (87%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 139 bits (337), Expect = 2e-33
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 368 SIVHRKCF 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 178 bits (433), Expect = 4e-45
Identities = 81/93 (87%), Positives = 86/93 (92%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFEQEMAT AS SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 216 KLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 276 HETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 166 bits (403), Expect = 2e-41
Identities = 76/93 (81%), Positives = 81/93 (87%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K YVA DFE E+A AS SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GI
Sbjct: 215 KLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGI 274
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
HETTY SIMKCDVDIRKDLYANTVLSGGT+M+P
Sbjct: 275 HETTYQSIMKCDVDIRKDLYANTVLSGGTSMFP 307
Score = 140 bits (340), Expect = 8e-34
Identities = 66/68 (97%), Positives = 66/68 (97%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
GIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 308 GIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 318 SIVHRKCF 295
SIVHRKCF
Sbjct: 368 SIVHRKCF 375
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/93 (47%), Positives = 55/93 (59%)
Frame = -1
Query: 778 KAGYVAFDFEQEMATXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 599
K Y+A+D EQE L + Y LPDG+VI +G ERF PE LFQP + +E G+
Sbjct: 219 KLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGL 278
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
E + I D+D R D Y + VLSGGTTMYP
Sbjct: 279 SELLFGCIQASDIDTRLDFYKHIVLSGGTTMYP 311
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -2
Query: 444 KIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 322
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDE 328
G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDE
Sbjct: 366 GFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDE 425
Query: 327 SGPSIVHRKC 298
SG SIV +KC
Sbjct: 426 SGKSIVEKKC 435
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = -1
Query: 703 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 539
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 538 ANTVLSGGTTM 506
+N ++GG ++
Sbjct: 353 SNVTVTGGNSL 363
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -1
Query: 736 TXASGXSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVD 557
T S++ SY LPD I I N FR PE LF+P +G E G+ SIMKCDVD
Sbjct: 228 TKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVD 287
Query: 556 IRKDLYANTVLSGGTTMY 503
+R+ LY+N VLSGGTT++
Sbjct: 288 LRQTLYSNIVLSGGTTLF 305
Score = 74.5 bits (175), Expect = 8e-14
Identities = 32/68 (47%), Positives = 47/68 (69%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 319
G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G
Sbjct: 307 GFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGA 366
Query: 318 SIVHRKCF 295
S +H++ F
Sbjct: 367 SAMHKRFF 374
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = -1
Query: 769 YVAFDFEQEMATX--ASGXSLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMEACGI 599
YV D+++E + + SL+ P Q I N RF C E LF+P G++ G+
Sbjct: 393 YVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGL 452
Query: 598 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
H+ + +I++C +D R+ LY N L+GG ++ P
Sbjct: 453 HQLIHEAILQCPIDSRRTLYRNIYLAGGASLMP 485
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/54 (33%), Positives = 36/54 (66%)
Frame = -2
Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 337
GIA+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 486 GIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = -1
Query: 679 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 503
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2
Query: 462 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 313
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = -1
Query: 679 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 499 WNRRPYAKGNHSSRPID 449
R + S P +
Sbjct: 323 GFRERLEREVRSMLPAE 339
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = -1
Query: 679 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 500
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 499 WNRRPYAKGNHSSRPID 449
R + S P +
Sbjct: 323 GFRERLEREVRSMLPAE 339
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.43
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 577 IMKCDVDIRKDLYANTVLSGGTTMYP 500
+ KC +D+RK L+ N +L+GG + P
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIP 223
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +1
Query: 328 LVVLLFRDPHLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRGT 507
LVV+ +L E ++D P+W+ D+ E C FL H V G
Sbjct: 22 LVVIFITIYTILHNESDNEIETSDVQLEKPIWKKEDIR------EMCQFLEHEVTGEEGD 75
Query: 508 WW 513
W
Sbjct: 76 QW 77
>Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical
protein ZK792.1b protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +1
Query: 328 LVVLLFRDPHLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRGT 507
LVV+ +L E ++D P+W+ D+ E C FL H V G
Sbjct: 22 LVVIFITIYTILHNESDNEIETSDVQLEKPIWKKEDIR------EMCQFLEHEVTGEEGD 75
Query: 508 WW 513
W
Sbjct: 76 QW 77
>Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +1
Query: 328 LVVLLFRDPHLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRGT 507
LVV+ +L E ++D P+W+ D+ E C FL H V G
Sbjct: 22 LVVIFITIYTILHNESDNEIETSDVQLEKPIWKKEDIR------EMCQFLEHEVTGEEGD 75
Query: 508 WW 513
W
Sbjct: 76 QW 77
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 328
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 339 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 238
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 328
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 420 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 259
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 747 RRWPPXHPAXPSRSLTNFPTVRSSPSE 667
R+ P HPA P L N P SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,863,717
Number of Sequences: 27780
Number of extensions: 353966
Number of successful extensions: 1077
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -